RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 A0A1W2PRE2 83 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 M0QY20 66 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 PEX7O00628 323 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 SNAI2O43623 268 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 APOMO95445 188 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 SMIM17P0DL12 118 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 CRYGAP11844 174 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 CDC34P49427 236 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-214ENST00000540865 KIAA1644Q3SXP7 199 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 SPANXN1Q5VSR9 72 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 OCC1Q8TAD7 63 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 HIST1H2BAQ96A08 127 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 LINC00526Q96FQ7 95 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 PRAC1Q96KF2 57 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 SDHCQ99643 169 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-214ENST00000540865 SEC22CQ9BRL7 303 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 HSPB11Q9Y547 144 aa2.69□□□□□ -1.98
SNHG1-214ENST00000540865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-214ENST00000540865 NOL3O60936 208 aaKnown RBP2.68□□□□□ -1.98
SNHG1-214ENST00000540865 CXorf1O96002 111 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 OR5AL1P0C617 328 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 BCL2P10415 239 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 XCL1P47992 114 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 NKX2-5P52952 324 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-214ENST00000540865 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-214ENST00000540865 COTL1Q14019 142 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 AMMECR1LQ6DCA0 310 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 NOTCH2NLQ7Z3S9 236 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 KRTAP11-1Q8IUC1 163 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 NUP35Q8NFH5 326 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 OR5A1Q8NGJ0 315 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 AP1S3Q96PC3 154 aa2.68□□□□□ -1.98
SNHG1-214ENST00000540865 NKX6-2Q9C056 277 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-214ENST00000540865 RPP21Q9H633 154 aaKnown RBP2.68□□□□□ -1.98
SNHG1-214ENST00000540865 IGLV7-46A0A075B6I9 117 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 MUC21A0A140T8X8 626 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 LINC00959A0A1B0GUT2 108 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 H7C423 109 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 CCL25O15444 150 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 LTAP01374 205 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 MBP02144 154 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 RPL18AQ02543 176 aaKnown RBP2.67□□□□□ -1.98
SNHG1-214ENST00000540865 LRRC37A5PQ49AS3 106 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 EIF5AL1Q6IS14 154 aaKnown RBP2.67□□□□□ -1.98
SNHG1-214ENST00000540865 RASL11AQ6T310 242 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 CD164L2Q6UWJ8 174 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 FMC1Q96HJ9 113 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 SMIM3Q9BZL3 60 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 WFDC1Q9HC57 220 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 NIT2Q9NQR4 276 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 NUDT15Q9NV35 164 aa2.67□□□□□ -1.98
SNHG1-214ENST00000540865 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
SNHG1-214ENST00000540865 A0A087X002 238 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 C19orf71A6NCJ1 209 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 C5orf52A6NGY3 159 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 PLA2G10O15496 165 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 LYRM1O43325 122 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 ZNF861PO60384 105 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 SIX6O95475 246 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 NCR2O95944 276 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 MGPP08493 103 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 ESDP10768 282 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 IL7P13232 177 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 ZNF25P17030 456 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-214ENST00000540865 UBE2G1P62253 170 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 CTAG1AP78358 180 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 ASB16-AS1Q495Z4 193 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 RNASEKQ6P5S7 137 aaKnown RBP2.66□□□□□ -1.98
SNHG1-214ENST00000540865 TYMSOSQ8TAI1 123 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 C2orf48Q96LS8 159 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 CAMK2N2Q96S95 79 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 RETNLBQ9BQ08 111 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 TCEAL7Q9BRU2 100 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 ACTR3CQ9C0K3 210 aaPredicted RBP2.66□□□□□ -1.98
SNHG1-214ENST00000540865 PYGO1Q9Y3Y4 419 aa2.66□□□□□ -1.98
SNHG1-214ENST00000540865 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.98
SNHG1-214ENST00000540865 FAM74A7A6NL05 159 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 BCL2L11O43521 198 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 PET100P0DJ07 73 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 NTF3P20783 257 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 ATP6V0CP27449 155 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 UBE2G2P60604 165 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 SSTP61278 116 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 UBE2BP63146 152 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 SERF2P84101 59 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 SS18Q15532 418 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 LINC00173Q6ZV60 143 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 PPP1R1CQ8WVI7 109 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 TMEM101Q96IK0 257 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 PSMG3Q9BT73 122 aaPredicted RBP2.65□□□□□ -1.99
SNHG1-214ENST00000540865 TNFSF18Q9UNG2 199 aa2.65□□□□□ -1.99
SNHG1-214ENST00000540865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-214ENST00000540865 FAM168BA1KXE4 195 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 IGKV2-29A2NJV5 120 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-214ENST00000540865 F8WDY8 70 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 G3V3Q6 166 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 COX7A2LO14548 114 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 MPC2O95563 127 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 APCSP02743 223 aa2.64□□□□□ -1.99
SNHG1-214ENST00000540865 S100A9P06702 114 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms