RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ZNF80P51504 273 aaPredicted RBP4.74□□□□□ -1.65
YBX3-209ENST00000540747 UFSP1Q6NVU6 142 aa4.74□□□□□ -1.65
YBX3-209ENST00000540747 FA2HQ7L5A8 372 aa4.74□□□□□ -1.65
YBX3-209ENST00000540747 Q8N976 141 aa4.74□□□□□ -1.65
YBX3-209ENST00000540747 ZC2HC1AQ96GY0 325 aa4.74□□□□□ -1.65
YBX3-209ENST00000540747 TPPP3Q9BW30 176 aa4.74□□□□□ -1.65
YBX3-209ENST00000540747 COX11Q9Y6N1 276 aa4.74□□□□□ -1.65
YBX3-209ENST00000540747 IGHV3-73A0A0B4J1V6 119 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 HSBP1L1C9JCN9 74 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 LEPROTL1O95214 131 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 BATFQ16520 125 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 PIK3CD-AS1Q5SR53 167 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 ZFP2Q6ZN57 461 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 Q6ZN92 141 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 MAP1LC3CQ9BXW4 147 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 TMEM191AQ9H0A3 160 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 HSPB8Q9UJY1 196 aa4.73□□□□□ -1.65
YBX3-209ENST00000540747 TMSB15BA0A087X1C1 80 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 FABP5P3A8MUU1 101 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 SH2D1AO60880 128 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 ARMS2P0C7Q2 107 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 IGLC3P0DOY3 106 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 ZNF25P17030 456 aaPredicted RBP4.72□□□□□ -1.65
YBX3-209ENST00000540747 CTRLP40313 264 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 COL5A1-AS1Q5SY13 56 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 LYZL1Q6UWQ5 148 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 PET117Q6UWS5 81 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 ATOH7Q8N100 152 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 GATD1Q8NB37 220 aa4.72□□□□□ -1.65
YBX3-209ENST00000540747 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 SYS1-DBNDD2H3BUS1 97 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 G0S2P27469 103 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 CRIP1P50238 77 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 RPL37AP61513 92 aaKnown RBP4.71□□□□□ -1.66
YBX3-209ENST00000540747 GAGE1Q13065 139 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 GAGE4Q13068 117 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 GAGE5Q13069 117 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 C14orf178Q8N769 122 aaPredicted RBP4.71□□□□□ -1.66
YBX3-209ENST00000540747 FER1L6-AS1Q8NA97 138 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 RMI2Q96E14 147 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 URB1-AS1Q96HZ7 61 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 PRELID3AQ96N28 172 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 CHCHD7Q9BUK0 85 aa4.71□□□□□ -1.66
YBX3-209ENST00000540747 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 IGKV3D-20A0A0C4DH25 116 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 IGHV1-24A0A0C4DH33 117 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 A8MWV9 139 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 TWIST1Q15672 202 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 FAM104BQ5XKR9 115 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 SMIM15Q7Z3B0 74 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 COX8CQ7Z4L0 72 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 ORMDL3Q8N138 153 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 OR10AG1Q8NH19 301 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 JPT2Q9H910 190 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 ST20Q9HBF5 79 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 AP5S1Q9NUS5 200 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 LAMTOR2Q9Y2Q5 125 aa4.7□□□□□ -1.66
YBX3-209ENST00000540747 LOC389332A0A1B0GUA5 103 aa4.69□□□□□ -1.66
YBX3-209ENST00000540747 PANO1I0J062 215 aa4.69□□□□□ -1.66
YBX3-209ENST00000540747 CKS2P33552 79 aa4.69□□□□□ -1.66
YBX3-209ENST00000540747 CIRBPQ14011 172 aaKnown RBP4.69□□□□□ -1.66
YBX3-209ENST00000540747 MRPL51Q4U2R6 128 aaKnown RBP4.69□□□□□ -1.66
YBX3-209ENST00000540747 PMCHL2Q9BQD1 86 aa4.69□□□□□ -1.66
YBX3-209ENST00000540747 KLK12Q9UKR0 248 aa4.69□□□□□ -1.66
YBX3-209ENST00000540747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
YBX3-209ENST00000540747 D6R8Y8 96 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 H0Y8G0 127 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 PPBPP02775 128 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 HINT1P49773 126 aaPredicted RBP4.68□□□□□ -1.66
YBX3-209ENST00000540747 MAJINQ3KP22 176 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 C14orf177Q52M58 125 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 KRTAP26-1Q6PEX3 210 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 SLC25A34Q6PIV7 304 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 ENHOQ6UWT2 76 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 Q6ZRU5 148 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 LINC00173Q6ZV60 143 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 MAP1LC3AQ9H492 121 aa4.68□□□□□ -1.66
YBX3-209ENST00000540747 MUC21A0A0G2JKD1 596 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 MUC21A0A140T8X8 626 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 USP17L23D6RBM5 183 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 RHODO00212 210 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 DLEU1O43261 78 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 PRSS1P07477 247 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 IGLC6P0CF74 106 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
YBX3-209ENST00000540747 UBE2D3P61077 147 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 UBE2D2P62837 147 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 LINC01559Q495D7 138 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 SDIM1Q6ZPB5 146 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 AMN1Q8IY45 258 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
YBX3-209ENST00000540747 TRBV10-1A0A0K0K1A3 114 aa4.66□□□□□ -1.66
YBX3-209ENST00000540747 hDV102S1A0JD36 115 aa4.66□□□□□ -1.66
YBX3-209ENST00000540747 HBDP02042 147 aa4.66□□□□□ -1.66
YBX3-209ENST00000540747 CACNG7P62955 275 aa4.66□□□□□ -1.66
YBX3-209ENST00000540747 LINC01545Q5VT33 79 aa4.66□□□□□ -1.66
YBX3-209ENST00000540747 DGAT2L7PQ6IED9 249 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms