RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 A0A1B0GUV1 79 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 IGLC6P0CF74 106 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 RPS10P46783 165 aaKnown RBP7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 ATP5L2Q7Z4Y8 100 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 C20orf203Q8NBC4 194 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 PRSS3P2Q8NHM4 247 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 BORCS7Q96B45 105 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
CLSTN3-209ENST00000539982 LPAP08519 4548 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 IGKV2-24A0A0C4DH68 120 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 MUC21A0A0G2JKD1 596 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 F2Z2F3 143 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 CTRLP40313 264 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 MRPL54Q6P161 138 aaKnown RBP7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 CFAP161Q6P656 301 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 RASL11AQ6T310 242 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 OR10AG1Q8NH19 301 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 TPPP3Q9BW30 176 aa7.23□□□□□ -1.25
CLSTN3-209ENST00000539982 IGLV4-60A0A075B6I1 120 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 A0A1B0GUT8 65 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 OR5AL1P0C617 328 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 RIGQ13278 110 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 COX19Q49B96 90 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 LYZL1Q6UWQ5 148 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
CLSTN3-209ENST00000539982 A0A1B0GW15 77 aa7.21□□□□□ -1.26
CLSTN3-209ENST00000539982 A0A1B0GXF2 115 aa7.21□□□□□ -1.26
CLSTN3-209ENST00000539982 SNAI2O43623 268 aa7.21□□□□□ -1.26
CLSTN3-209ENST00000539982 HBBP68871 147 aa7.21□□□□□ -1.26
CLSTN3-209ENST00000539982 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
CLSTN3-209ENST00000539982 S100A8P05109 93 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 CACNG7P62955 275 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 SPANXN1Q5VSR9 72 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 Q6ZRP5 223 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 GNB1LQ9BYB4 327 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 CNFNQ9BYD5 112 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 TRAPPC1Q9Y5R8 145 aa7.2□□□□□ -1.26
CLSTN3-209ENST00000539982 A0A096LNI7 61 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 MUC21A0A140T8X8 626 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 GAGE12HA6NDE8 117 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 MT-ND6P03923 174 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 SMIM17P0DL12 118 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 CAMPP49913 170 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 TWIST1Q15672 202 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 TMEM136Q6ZRR5 245 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 TMEM243Q9BU79 118 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 LINC00474Q9P2X8 69 aa7.19□□□□□ -1.26
CLSTN3-209ENST00000539982 C1orf196B1AJZ1 125 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 H7C1H1 209 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 M0QY20 66 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 TRGC2P03986 189 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 NTF3P20783 257 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 SSTP61278 116 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 GATD1Q8NB37 220 aa7.18□□□□□ -1.26
CLSTN3-209ENST00000539982 APCSP02743 223 aa7.17□□□□□ -1.26
CLSTN3-209ENST00000539982 FABP9Q0Z7S8 132 aa7.17□□□□□ -1.26
CLSTN3-209ENST00000539982 MRPL18Q9H0U6 180 aaKnown RBP7.17□□□□□ -1.26
CLSTN3-209ENST00000539982 MUC2Q02817 5179 aa7.17□□□□□ -1.26
CLSTN3-209ENST00000539982 UBE2L6O14933 153 aa7.16□□□□□ -1.26
CLSTN3-209ENST00000539982 RAB5BP61020 215 aa7.16□□□□□ -1.26
CLSTN3-209ENST00000539982 SMIM15Q7Z3B0 74 aa7.16□□□□□ -1.26
CLSTN3-209ENST00000539982 AP1S3Q96PC3 154 aa7.16□□□□□ -1.26
CLSTN3-209ENST00000539982 TMA7Q9Y2S6 64 aaKnown RBP7.16□□□□□ -1.26
CLSTN3-209ENST00000539982 GVQW2A0A096LPI5 108 aaPredicted RBP7.15□□□□□ -1.26
CLSTN3-209ENST00000539982 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
CLSTN3-209ENST00000539982 TMEM191AQ9H0A3 160 aa7.15□□□□□ -1.26
CLSTN3-209ENST00000539982 PKIGQ9Y2B9 76 aa7.15□□□□□ -1.26
CLSTN3-209ENST00000539982 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
CLSTN3-209ENST00000539982 MGPP08493 103 aa7.14□□□□□ -1.27
CLSTN3-209ENST00000539982 SUMO4Q6EEV6 95 aa7.14□□□□□ -1.27
CLSTN3-209ENST00000539982 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
CLSTN3-209ENST00000539982 IGKV3OR2-268A0A0C4DH90 116 aa7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 AMTP48728 403 aa7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 KIAA1644Q3SXP7 199 aa7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 FAM104BQ5XKR9 115 aa7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
CLSTN3-209ENST00000539982 KRTAP9-6A0A140TA67 174 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BKO60814 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BJP06899 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 RAB4AP20338 218 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BOP23527 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BBP33778 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BDP58876 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BCP62807 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 NIT2Q9NQR4 276 aa7.12□□□□□ -1.27
CLSTN3-209ENST00000539982 COTL1Q14019 142 aa7.11□□□□□ -1.27
CLSTN3-209ENST00000539982 MRPL51Q4U2R6 128 aaKnown RBP7.11□□□□□ -1.27
CLSTN3-209ENST00000539982 TRAV26-2A0A0B4J265 109 aa7.1□□□□□ -1.27
CLSTN3-209ENST00000539982 PPBPP02775 128 aa7.1□□□□□ -1.27
CLSTN3-209ENST00000539982 FOXI1Q12951 378 aa7.1□□□□□ -1.27
CLSTN3-209ENST00000539982 CARD19Q96LW7 228 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms