RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 LOC389332A0A1B0GUA5 103 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 IBA57-AS1B1ANH7 110 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 RPS10P46783 165 aaKnown RBP4.4□□□□□ -1.71
SNHG1-212ENST00000539975 LAGE3Q14657 143 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 PRSS3P2Q8NHM4 247 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 Q9HAA7 133 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 NXT2Q9NPJ8 142 aaKnown RBP4.4□□□□□ -1.71
SNHG1-212ENST00000539975 KLK12Q9UKR0 248 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 MUC4Q99102 2169 aa4.4□□□□□ -1.71
SNHG1-212ENST00000539975 TGIF2-C20orf24A0A0A6YYL0 155 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 K7EMI3 77 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 ZNF25P17030 456 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-212ENST00000539975 POLR2KP53803 58 aaKnown RBP4.39□□□□□ -1.71
SNHG1-212ENST00000539975 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
SNHG1-212ENST00000539975 ORMDL2Q53FV1 153 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 ATRAIDQ6UW56 229 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 Q6ZR54 194 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 NTM-AS1Q6ZSK4 140 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 NRACQ8N912 160 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 OR5A1Q8NGJ0 315 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 DEFB104AQ8WTQ1 72 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 UBE2WQ96B02 151 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 SMIM2Q9BVW6 85 aa4.39□□□□□ -1.71
SNHG1-212ENST00000539975 IGKV2D-24A0A075B6R9 120 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 PRSS29PA6NIE9 313 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 TRIAP1O43715 76 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 TSHBP01222 138 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 NPYP01303 97 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 FGF6P10767 208 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 RAB5BP61020 215 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 RBX1P62877 108 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 MIAQ16674 131 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 KIAA1644Q3SXP7 199 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 MPV17L2Q567V2 206 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 LINC00269Q8N2A0 174 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 Q8N976 141 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
SNHG1-212ENST00000539975 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-212ENST00000539975 TRAV8-4A0A0B4J246 113 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 IGKV2-29A2NJV5 120 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-212ENST00000539975 IFI27P40305 119 aaPredicted RBP4.37□□□□□ -1.71
SNHG1-212ENST00000539975 REG3AQ06141 175 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 PAPPA-AS1Q5QFB9 102 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 Q6ZN92 141 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 FA2HQ7L5A8 372 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 CBLN2Q8IUK8 224 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 LINC00518Q8N0U6 118 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 Q8N8P6 123 aa4.37□□□□□ -1.71
SNHG1-212ENST00000539975 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
SNHG1-212ENST00000539975 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
SNHG1-212ENST00000539975 SS18Q15532 418 aa4.36□□□□□ -1.71
SNHG1-212ENST00000539975 ALKBH7Q9BT30 221 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-212ENST00000539975 SPANXA1Q9NS26 97 aa4.36□□□□□ -1.71
SNHG1-212ENST00000539975 CYSLTR1Q9Y271 337 aa4.36□□□□□ -1.71
SNHG1-212ENST00000539975 CBY1Q9Y3M2 126 aa4.36□□□□□ -1.71
SNHG1-212ENST00000539975 CCL25O15444 150 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 ESDP10768 282 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 CLPSL2Q6UWE3 100 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 MRPL52Q86TS9 123 aaKnown RBP4.35□□□□□ -1.71
SNHG1-212ENST00000539975 ZNF664Q8N3J9 261 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 C2orf88Q9BSF0 95 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 TIMM21Q9BVV7 248 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
SNHG1-212ENST00000539975 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
SNHG1-212ENST00000539975 IGLV4-60A0A075B6I1 120 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 C1orf196B1AJZ1 125 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 RTL8CO15255 209 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 LINC00614P0C842 121 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 BAGE3Q86Y29 109 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 PRR34Q9NV39 138 aa4.34□□□□□ -1.71
SNHG1-212ENST00000539975 NACAE9PAV3 2078 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 IGLV10-54A0A075B6I4 117 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 TRGC2P03986 189 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 ENHOQ6UWT2 76 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 TEX43Q6ZNM6 134 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 VCX2Q9H322 139 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 CDC42SE2Q9NRR3 84 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 UBE2D4Q9Y2X8 147 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 CHTOPQ9Y3Y2 248 aaKnown RBP4.33□□□□□ -1.72
SNHG1-212ENST00000539975 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
SNHG1-212ENST00000539975 TRAV13-1A0A0B4J241 112 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 IFITM10A6NMD0 228 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-212ENST00000539975 HSBP1O75506 76 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 NPSP0C0P6 89 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 XCL1P47992 114 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 RPL39P62891 51 aaKnown RBP4.32□□□□□ -1.72
SNHG1-212ENST00000539975 SEC11AP67812 179 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
SNHG1-212ENST00000539975 ERASQ7Z444 233 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 C18orf32Q8TCD1 76 aa4.32□□□□□ -1.72
SNHG1-212ENST00000539975 CHCHD1Q96BP2 118 aaKnown RBP4.32□□□□□ -1.72
SNHG1-212ENST00000539975 TMEM141Q96I45 108 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms