RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
DDB1-216ENST00000539739 DNAH7Q8WXX0 4024 aa10.82□□□□□ -0.68
DDB1-216ENST00000539739 H3BMG7 143 aa10.81□□□□□ -0.68
DDB1-216ENST00000539739 RHOHQ15669 191 aa10.81□□□□□ -0.68
DDB1-216ENST00000539739 RNASEKQ6P5S7 137 aaKnown RBP10.81□□□□□ -0.68
DDB1-216ENST00000539739 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
DDB1-216ENST00000539739 E9PLD3 99 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 H3BNG1 76 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 K7EQD1 137 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 LINC00315P59091 139 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 H7C1H1 209 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 FOXI1Q12951 378 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 GAGE13Q4V321 117 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 Q6ZSN1 163 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 C15orf53Q8NAA6 179 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 VSIG2Q96IQ7 327 aa10.8□□□□□ -0.68
DDB1-216ENST00000539739 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
DDB1-216ENST00000539739 GYPEP15421 78 aa10.78□□□□□ -0.68
DDB1-216ENST00000539739 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
DDB1-216ENST00000539739 DNAJC30Q96LL9 226 aa10.78□□□□□ -0.68
DDB1-216ENST00000539739 ICOSQ9Y6W8 199 aa10.78□□□□□ -0.68
DDB1-216ENST00000539739 TRBV10-1A0A0K0K1A3 114 aa10.77□□□□□ -0.68
DDB1-216ENST00000539739 MRPL23Q16540 153 aaKnown RBP10.77□□□□□ -0.68
DDB1-216ENST00000539739 CASC10Q5T4H9 136 aa10.77□□□□□ -0.68
DDB1-216ENST00000539739 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.68
DDB1-216ENST00000539739 SUMO4Q6EEV6 95 aa10.77□□□□□ -0.68
DDB1-216ENST00000539739 GATD1Q8NB37 220 aa10.77□□□□□ -0.68
DDB1-216ENST00000539739 CSDC2Q9Y534 153 aaKnown RBP10.77□□□□□ -0.68
DDB1-216ENST00000539739 APOMO95445 188 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 WFDC2Q14508 124 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 TAL2Q16559 108 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 IGHV1-24A0A0C4DH33 117 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 M0QXV9 152 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 M0QY20 66 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
DDB1-216ENST00000539739 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
DDB1-216ENST00000539739 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
DDB1-216ENST00000539739 LOC100131303A0A0U1RQF7 123 aa10.75□□□□□ -0.69
DDB1-216ENST00000539739 P0DMU3 169 aa10.75□□□□□ -0.69
DDB1-216ENST00000539739 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
DDB1-216ENST00000539739 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
DDB1-216ENST00000539739 ETDBQ3ZM63 59 aa10.75□□□□□ -0.69
DDB1-216ENST00000539739 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
DDB1-216ENST00000539739 A0A096LPF7 62 aa10.74□□□□□ -0.69
DDB1-216ENST00000539739 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
DDB1-216ENST00000539739 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
DDB1-216ENST00000539739 MRPL51Q4U2R6 128 aaKnown RBP10.74□□□□□ -0.69
DDB1-216ENST00000539739 LGALS9CQ6DKI2 356 aa10.74□□□□□ -0.69
DDB1-216ENST00000539739 PPDPFLQ8WWR9 84 aa10.74□□□□□ -0.69
DDB1-216ENST00000539739 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
DDB1-216ENST00000539739 CSMD3Q7Z407 3707 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 TRBV7-3A0A075B6L6 115 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
DDB1-216ENST00000539739 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 PPP1R17O96001 155 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 CKS2P33552 79 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 XGP55808 180 aa10.73□□□□□ -0.69
DDB1-216ENST00000539739 RAB37Q96AX2 223 aa10.72□□□□□ -0.69
DDB1-216ENST00000539739 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
DDB1-216ENST00000539739 Q9UF83 564 aa10.72□□□□□ -0.69
DDB1-216ENST00000539739 IFITM1P13164 125 aa10.71□□□□□ -0.69
DDB1-216ENST00000539739 LYRM7Q5U5X0 104 aa10.71□□□□□ -0.69
DDB1-216ENST00000539739 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.69
DDB1-216ENST00000539739 A0A1B0GX51 115 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 SMKR1H3BMG3 65 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 NCR2O95944 276 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 GAGE2BQ13066 116 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
DDB1-216ENST00000539739 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
DDB1-216ENST00000539739 A0A1B0GWB2 263 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 D6R8Y8 96 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 UBE2D3P61077 147 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 UBE2D2P62837 147 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 PRELID3AQ96N28 172 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 GCSHP23434 173 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 CCL18P55774 89 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 DAZ4Q86SG3 579 aaKnown RBP10.69□□□□□ -0.7
DDB1-216ENST00000539739 DAZ3Q9NR90 486 aaKnown RBP10.69□□□□□ -0.7
DDB1-216ENST00000539739 TP73-AS1Q9UF72 201 aa10.69□□□□□ -0.7
DDB1-216ENST00000539739 DYNC2H1Q8NCM8 4307 aaKnown RBP10.68□□□□□ -0.7
DDB1-216ENST00000539739 STARD9Q9P2P6 4700 aa10.68□□□□□ -0.7
DDB1-216ENST00000539739 F8WDY8 70 aa10.68□□□□□ -0.7
DDB1-216ENST00000539739 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
DDB1-216ENST00000539739 OR13C6PQ8NH95 151 aa10.68□□□□□ -0.7
DDB1-216ENST00000539739 TRBV6-5A0A0K0K1A5 114 aa10.67□□□□□ -0.7
DDB1-216ENST00000539739 PRSS29PA6NIE9 313 aa10.67□□□□□ -0.7
DDB1-216ENST00000539739 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
DDB1-216ENST00000539739 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 ESRGQ1W209 222 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 LYPD5Q6UWN5 251 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 UBE2DNLQ8IWF7 75 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 NRACQ8N912 160 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms