RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PTPRQQ9UMZ3 2332 aa4.85□□□□□ -1.63
LSAMP-207ENST00000539563 CRIP1P50238 77 aa4.85□□□□□ -1.63
LSAMP-207ENST00000539563 TRBV6-5A0A0K0K1A5 114 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 CRIP3Q6Q6R5 217 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 TTTY13Q9BZ97 58 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 PRO3102Q9H379 93 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 PYGO1Q9Y3Y4 419 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 M0QY20 66 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 TIMM17BO60830 172 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 MBD6Q96DN6 1003 aa4.84□□□□□ -1.63
LSAMP-207ENST00000539563 INAFM1C9JVW0 142 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 Q6ZSV7 163 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 ZNF295-AS1Q8N0V1 137 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 SS18L2Q9UHA2 77 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 AGRNO00468 2067 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 J3KT08 172 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 C1orf229Q6ZS94 237 aaPredicted RBP4.84□□□□□ -1.64
LSAMP-207ENST00000539563 UPK3BQ9BT76 320 aa4.84□□□□□ -1.64
LSAMP-207ENST00000539563 RNF185Q96GF1 192 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 TRAV10A0A0B4J240 114 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 TRBV27A0A0K0K1C4 114 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 MUC6Q6W4X9 2439 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 ZNF702PQ9H963 129 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 CDKN2A-AS1Q9UH64 79 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 ATP5EP2Q5VTU8 51 aa4.83□□□□□ -1.64
LSAMP-207ENST00000539563 TRBV30A0A0K0K1B3 111 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 ZNF22P17026 224 aaPredicted RBP4.82□□□□□ -1.64
LSAMP-207ENST00000539563 FAM110AQ9BQ89 295 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 Q8N6K4 173 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 IGKV4-1P06312 121 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 LINC00308Q8TCZ7 52 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 WFDC11Q8NEX6 87 aa4.82□□□□□ -1.64
LSAMP-207ENST00000539563 MRPS36P82909 103 aaKnown RBP4.82□□□□□ -1.64
LSAMP-207ENST00000539563 COX17Q14061 63 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 C22orf34Q6ZV56 151 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 MUC7Q8TAX7 377 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 SORL1Q92673 2214 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 LELP1Q5T871 98 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 FAM19A1Q7Z5A9 133 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 HIGD2AQ9BW72 106 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 TRAV23DV6A0A075B6W5 121 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 LY6G6DO95868 133 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 NRACQ8N912 160 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
LSAMP-207ENST00000539563 A0A087WZ39 114 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 CD164L2Q6UWJ8 174 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 FRYLO94915 3013 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 TRIOO75962 3097 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 SYCNQ0VAF6 134 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 RNASE8Q8TDE3 154 aaKnown RBP4.8□□□□□ -1.64
LSAMP-207ENST00000539563 ZNF706Q9Y5V0 76 aaPredicted RBP4.8□□□□□ -1.64
LSAMP-207ENST00000539563 IGLV2-11P01706 119 aa4.8□□□□□ -1.64
LSAMP-207ENST00000539563 PRRC2AP48634 2157 aaKnown RBP4.79□□□□□ -1.64
LSAMP-207ENST00000539563 IGLV4-69A0A075B6H9 119 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 KLLNB2CW77 178 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 IGLV1-40P01703 118 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 RNASE3P12724 160 aaKnown RBP4.79□□□□□ -1.64
LSAMP-207ENST00000539563 PTH2Q96A98 100 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 YPEL4Q96NS1 127 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 UQCRQO14949 82 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 TSHBP01222 138 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 MRGPRG-AS1Q2M3A8 158 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 OTOGLQ3ZCN5 2332 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 ZFHX4Q86UP3 3567 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 KPRPQ5T749 579 aaPredicted RBP4.79□□□□□ -1.64
LSAMP-207ENST00000539563 C9orf85Q96MD7 179 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 DHRS4-AS1Q9P1J3 65 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 HIVEP2P31629 2446 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 M0R378 163 aa4.79□□□□□ -1.64
LSAMP-207ENST00000539563 NDUFC1O43677 76 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 TRIAP1O43715 76 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 PROK1P58294 105 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 LINC00482Q8N8I6 264 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 DCANP1Q8TF63 244 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 BBC3Q96PG8 261 aaPredicted RBP4.78□□□□□ -1.64
LSAMP-207ENST00000539563 TP73-AS1Q9UF72 201 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 MAPKAPK5-AS1Q8N8E1 139 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 LINC01006Q8NI28 216 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 UBE2D1P51668 147 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 COL6A3P12111 3177 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 TEX49A0A1B0GTD5 131 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
LSAMP-207ENST00000539563 RBX1P62877 108 aa4.78□□□□□ -1.64
LSAMP-207ENST00000539563 USP17L23D6RBM5 183 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 PRB2P02812 416 aaPredicted RBP4.77□□□□□ -1.65
LSAMP-207ENST00000539563 NDUFV3P56181 108 aaKnown RBP4.77□□□□□ -1.65
LSAMP-207ENST00000539563 NDUFA7O95182 113 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 LOC107984640A0A0U1RRK4 108 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 FAM19A5Q7Z5A7 132 aaPredicted RBP4.77□□□□□ -1.65
LSAMP-207ENST00000539563 IMUPQ9GZP8 106 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 LINC00959A0A1B0GUT2 108 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 SDIM1Q6ZPB5 146 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 C6orf99Q4VX62 202 aa4.77□□□□□ -1.65
LSAMP-207ENST00000539563 CNFNQ9BYD5 112 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms