RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 TWIST1Q15672 202 aa9.18□□□□□ -0.94
CCDC144NL-202ENST00000539177 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
CCDC144NL-202ENST00000539177 SMCO4Q9NRQ5 59 aa9.18□□□□□ -0.94
CCDC144NL-202ENST00000539177 IGKV2-24A0A0C4DH68 120 aa9.17□□□□□ -0.94
CCDC144NL-202ENST00000539177 MUC21A0A0G2JKD1 596 aa9.17□□□□□ -0.94
CCDC144NL-202ENST00000539177 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
CCDC144NL-202ENST00000539177 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
CCDC144NL-202ENST00000539177 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
CCDC144NL-202ENST00000539177 OR10AG1Q8NH19 301 aa9.17□□□□□ -0.94
CCDC144NL-202ENST00000539177 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
CCDC144NL-202ENST00000539177 MUC21A0A140T8X8 626 aa9.16□□□□□ -0.94
CCDC144NL-202ENST00000539177 SSTP61278 116 aa9.16□□□□□ -0.94
CCDC144NL-202ENST00000539177 COX6A2Q02221 97 aa9.16□□□□□ -0.94
CCDC144NL-202ENST00000539177 COX19Q49B96 90 aa9.16□□□□□ -0.94
CCDC144NL-202ENST00000539177 F5H697 171 aa9.15□□□□□ -0.94
CCDC144NL-202ENST00000539177 TMEM97Q5BJF2 176 aa9.15□□□□□ -0.94
CCDC144NL-202ENST00000539177 RASL11AQ6T310 242 aa9.15□□□□□ -0.94
CCDC144NL-202ENST00000539177 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
CCDC144NL-202ENST00000539177 HBBP68871 147 aa9.14□□□□□ -0.95
CCDC144NL-202ENST00000539177 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
CCDC144NL-202ENST00000539177 STPG4Q8N801 248 aa9.14□□□□□ -0.95
CCDC144NL-202ENST00000539177 C20orf203Q8NBC4 194 aa9.14□□□□□ -0.95
CCDC144NL-202ENST00000539177 MRPL54Q6P161 138 aaKnown RBP9.13□□□□□ -0.95
CCDC144NL-202ENST00000539177 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
CCDC144NL-202ENST00000539177 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 IGHV1-24A0A0C4DH33 117 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 CAMPP49913 170 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 SPINK6Q6UWN8 80 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
CCDC144NL-202ENST00000539177 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
CCDC144NL-202ENST00000539177 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
CCDC144NL-202ENST00000539177 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
CCDC144NL-202ENST00000539177 A0A096LNI7 61 aa9.09□□□□□ -0.95
CCDC144NL-202ENST00000539177 H7C1H1 209 aa9.09□□□□□ -0.95
CCDC144NL-202ENST00000539177 RPS10P46783 165 aaKnown RBP9.09□□□□□ -0.95
CCDC144NL-202ENST00000539177 CBLN2Q8IUK8 224 aa9.09□□□□□ -0.95
CCDC144NL-202ENST00000539177 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
CCDC144NL-202ENST00000539177 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
CCDC144NL-202ENST00000539177 IGKV3OR2-268A0A0C4DH90 116 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 GAGE12HA6NDE8 117 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 PPP1R17O96001 155 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 MT-ND6P03923 174 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 MGPP08493 103 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 GATD1Q8NB37 220 aa9.08□□□□□ -0.96
CCDC144NL-202ENST00000539177 TGIF2-C20orf24A0A0A6YYL0 155 aa9.07□□□□□ -0.96
CCDC144NL-202ENST00000539177 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
CCDC144NL-202ENST00000539177 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
CCDC144NL-202ENST00000539177 PPBPP02775 128 aa9.06□□□□□ -0.96
CCDC144NL-202ENST00000539177 RAB4AP20338 218 aa9.06□□□□□ -0.96
CCDC144NL-202ENST00000539177 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC144NL-202ENST00000539177 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
CCDC144NL-202ENST00000539177 YPEL4Q96NS1 127 aa9.06□□□□□ -0.96
CCDC144NL-202ENST00000539177 A0A1B0GUV1 79 aa9.05□□□□□ -0.96
CCDC144NL-202ENST00000539177 SCO1O75880 301 aa9.05□□□□□ -0.96
CCDC144NL-202ENST00000539177 APCSP02743 223 aa9.05□□□□□ -0.96
CCDC144NL-202ENST00000539177 TMEM136Q6ZRR5 245 aa9.05□□□□□ -0.96
CCDC144NL-202ENST00000539177 AMN1Q8IY45 258 aa9.05□□□□□ -0.96
CCDC144NL-202ENST00000539177 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
CCDC144NL-202ENST00000539177 COLCA2A8K830 154 aa9.04□□□□□ -0.96
CCDC144NL-202ENST00000539177 UBE2L6O14933 153 aa9.04□□□□□ -0.96
CCDC144NL-202ENST00000539177 CKS2P33552 79 aa9.04□□□□□ -0.96
CCDC144NL-202ENST00000539177 SUMO4Q6EEV6 95 aa9.04□□□□□ -0.96
CCDC144NL-202ENST00000539177 Q6ZRP5 223 aa9.04□□□□□ -0.96
CCDC144NL-202ENST00000539177 M0QY20 66 aa9.03□□□□□ -0.96
CCDC144NL-202ENST00000539177 FABP9Q0Z7S8 132 aa9.03□□□□□ -0.96
CCDC144NL-202ENST00000539177 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
CCDC144NL-202ENST00000539177 NIT2Q9NQR4 276 aa9.03□□□□□ -0.96
CCDC144NL-202ENST00000539177 RAB5AP20339 215 aa9.02□□□□□ -0.97
CCDC144NL-202ENST00000539177 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
CCDC144NL-202ENST00000539177 MRPL18Q9H0U6 180 aaKnown RBP9.02□□□□□ -0.97
CCDC144NL-202ENST00000539177 LAMTOR2Q9Y2Q5 125 aa9.02□□□□□ -0.97
CCDC144NL-202ENST00000539177 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
CCDC144NL-202ENST00000539177 AMTP48728 403 aa9.01□□□□□ -0.97
CCDC144NL-202ENST00000539177 MUC2Q02817 5179 aa9.01□□□□□ -0.97
CCDC144NL-202ENST00000539177 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
CCDC144NL-202ENST00000539177 D6R8Y8 96 aa9□□□□□ -0.97
CCDC144NL-202ENST00000539177 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
CCDC144NL-202ENST00000539177 TRAV26-2A0A0B4J265 109 aa8.99□□□□□ -0.97
CCDC144NL-202ENST00000539177 PRELID3AQ96N28 172 aa8.99□□□□□ -0.97
CCDC144NL-202ENST00000539177 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
CCDC144NL-202ENST00000539177 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
CCDC144NL-202ENST00000539177 LINC00474Q9P2X8 69 aa8.99□□□□□ -0.97
CCDC144NL-202ENST00000539177 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
CCDC144NL-202ENST00000539177 COTL1Q14019 142 aa8.98□□□□□ -0.97
CCDC144NL-202ENST00000539177 KIAA1644Q3SXP7 199 aa8.98□□□□□ -0.97
CCDC144NL-202ENST00000539177 VCYO14598 125 aa8.97□□□□□ -0.97
CCDC144NL-202ENST00000539177 TNFRSF6BO95407 300 aa8.97□□□□□ -0.97
CCDC144NL-202ENST00000539177 CARD19Q96LW7 228 aa8.97□□□□□ -0.97
CCDC144NL-202ENST00000539177 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 TCAPO15273 167 aa8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 NCR2O95944 276 aa8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 TRGC2P03986 189 aa8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 SUMO2P61956 95 aaKnown RBP8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 FOXI1Q12951 378 aa8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
CCDC144NL-202ENST00000539177 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms