RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CXCL1P09341 107 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF791Q3KP31 576 aaPredicted RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 Q6ZQT0 140 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 Q6ZS52 159 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 CTAGE3PQ8IX95 158 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 C4orf33Q8N1A6 199 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 LINC00474Q9P2X8 69 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 SCP2D1Q9UJQ7 156 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 LRBAP50851 2863 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 CITO14578 2027 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 DNAH5Q8TE73 4624 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 PNMA8CA0A1B0GUJ8 204 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 RBAKDNA6NC62 111 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 H3BQ15 152 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 IGHV3-30P01768 117 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 IGHV3-30-5P0DP03 117 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 KRTAP10-4P60372 401 aaPredicted RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 SNRPD3P62318 126 aaKnown RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 SUPT4H1P63272 117 aaKnown RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 HBBP68871 147 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 KLRD1Q13241 179 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 C5orf38Q86SI9 138 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 SCGB3A1Q96QR1 104 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TXNDC17Q9BRA2 123 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 CACYBPQ9HB71 228 aaKnown RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 COMMD3Q9UBI1 195 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 CKLFQ9UBR5 152 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 HIVEP3Q5T1R4 2406 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 USP9YO00507 2555 aaPredicted RBP0.39□□□□□ -2.35
HIF1A-204ENST00000539097 HIVEP1P15822 2718 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 DMXL2Q8TDJ6 3036 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 VPS13AQ96RL7 3174 aa0.39□□□□□ -2.35
HIF1A-204ENST00000539097 TMEM262E9PQX1 116 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 H7BZZ5 65 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 HYPMO75409 117 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 PROSCO94903 275 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 HBDP02042 147 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 RNASE3P12724 160 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF345Q14585 488 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 NNATQ16517 81 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 Q5VV11 94 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 ATP11AUNQ6ZP68 121 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF833PQ6ZTB9 187 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TCTE3Q8IZS6 198 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 ANKRD29Q8N6D5 301 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 OR8B3Q8NGG8 313 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 ODF3Q96PU9 254 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 SLC50A1Q9BRV3 221 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 CHD7Q9P2D1 2997 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 DNAH8Q96JB1 4490 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 FAM92AA1XBS5 289 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 H3BRN7 92 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TPST1O60507 370 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV4-1P06312 121 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TRGC1P0CF51 173 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 GNG4P50150 75 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 LSM3P62310 102 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 DYNLT1P63172 113 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 MEIG1Q5JSS6 88 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 RNASE11Q8TAA1 199 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 DNAJC9Q8WXX5 260 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 AQP3Q92482 292 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TTTY12Q9BZ98 90 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 SLC39A9Q9NUM3 307 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TAS2R8Q9NYW2 309 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 MRPL35Q9NZE8 188 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 BAIAP2Q9UQB8 552 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 MUC17Q685J3 4493 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 SPTBP11277 2137 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 LRP2P98164 4655 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 IGLC7A0M8Q6 106 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 J3QRE1 110 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 K7ERJ3 54 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 M0R143 59 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 SLC25A4P12235 298 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 RPL35P42766 123 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 MIC13Q5XKP0 118 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 LINC00305Q7Z4B0 112 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 WFDC11Q8NEX6 87 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 OR5AK2Q8NH90 309 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 IMMP2LQ96T52 175 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 SERP1Q9Y6X1 66 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 NBEAL1Q6ZS30 2694 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 DSPP15924 2871 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 MUC4Q99102 2169 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TRAV13-1A0A0B4J241 112 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TRAV3A0A0B4J244 114 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 A0A0J9YY99 117 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 K7ERU9 68 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 GEMIN2O14893 280 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 UBE2L6O14933 153 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 CREBL2O60519 120 aaPredicted RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 HMGA1P17096 107 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 ADCYAP1P18509 176 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 RPL30P62888 115 aaKnown RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 DEFB121Q5J5C9 76 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 LCN15Q6UWW0 184 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 HIST3H2BBQ8N257 126 aa0.38□□□□□ -2.35
HIF1A-204ENST00000539097 TCEAL2Q9H3H9 227 aaPredicted RBP0.38□□□□□ -2.35
HIF1A-204ENST00000539097 FLNAP21333 2647 aaKnown RBP0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms