RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.41
C2CD3-213ENST00000539061 ZNF415Q09FC8 603 aa12.46□□□□□ -0.42
C2CD3-213ENST00000539061 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
C2CD3-213ENST00000539061 C5orf38Q86SI9 138 aa12.45□□□□□ -0.42
C2CD3-213ENST00000539061 IGHV3OR16-12A0A075B7B8 117 aa12.45□□□□□ -0.42
C2CD3-213ENST00000539061 IGHV3-53P01767 116 aa12.45□□□□□ -0.42
C2CD3-213ENST00000539061 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
C2CD3-213ENST00000539061 LINC00694P0DN24 101 aa12.45□□□□□ -0.42
C2CD3-213ENST00000539061 PRM2P04554 102 aa12.44□□□□□ -0.42
C2CD3-213ENST00000539061 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
C2CD3-213ENST00000539061 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
C2CD3-213ENST00000539061 PIMREGQ9BSJ6 248 aa12.43□□□□□ -0.42
C2CD3-213ENST00000539061 C22orf24Q9Y442 160 aa12.43□□□□□ -0.42
C2CD3-213ENST00000539061 PRIMA1Q86XR5 153 aa12.42□□□□□ -0.42
C2CD3-213ENST00000539061 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
C2CD3-213ENST00000539061 TMEM89A2RUT3 159 aa12.41□□□□□ -0.42
C2CD3-213ENST00000539061 SMIM1B2RUZ4 78 aa12.41□□□□□ -0.42
C2CD3-213ENST00000539061 FAM218AQ96MZ4 157 aa12.41□□□□□ -0.42
C2CD3-213ENST00000539061 COX7CP15954 63 aa12.41□□□□□ -0.42
C2CD3-213ENST00000539061 GAGE2AQ6NT46 116 aa12.41□□□□□ -0.42
C2CD3-213ENST00000539061 NRGNQ92686 78 aa12.41□□□□□ -0.42
C2CD3-213ENST00000539061 DEFB131AP59861 70 aa12.4□□□□□ -0.42
C2CD3-213ENST00000539061 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
C2CD3-213ENST00000539061 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
C2CD3-213ENST00000539061 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
C2CD3-213ENST00000539061 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
C2CD3-213ENST00000539061 A8MTW9 85 aa12.39□□□□□ -0.43
C2CD3-213ENST00000539061 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
C2CD3-213ENST00000539061 MALP21145 153 aa12.39□□□□□ -0.43
C2CD3-213ENST00000539061 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
C2CD3-213ENST00000539061 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
C2CD3-213ENST00000539061 PF4P02776 101 aa12.38□□□□□ -0.43
C2CD3-213ENST00000539061 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
C2CD3-213ENST00000539061 HOXD3P31249 432 aaPredicted RBP12.38□□□□□ -0.43
C2CD3-213ENST00000539061 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
C2CD3-213ENST00000539061 TRAV13-1A0A0B4J241 112 aa12.37□□□□□ -0.43
C2CD3-213ENST00000539061 RS1O15537 224 aa12.37□□□□□ -0.43
C2CD3-213ENST00000539061 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
C2CD3-213ENST00000539061 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
C2CD3-213ENST00000539061 Q9HAA7 133 aa12.37□□□□□ -0.43
C2CD3-213ENST00000539061 ATOX1O00244 68 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 MSMBP08118 114 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 GNLYP22749 145 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 C11orf72Q8NBR9 251 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 C2orf48Q96LS8 159 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 CRYGAP11844 174 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 HIST1H4AP62805 103 aaKnown RBP12.36□□□□□ -0.43
C2CD3-213ENST00000539061 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 COL12A1Q99715 3063 aa12.36□□□□□ -0.43
C2CD3-213ENST00000539061 KLK5Q9Y337 293 aaPredicted RBP12.35□□□□□ -0.43
C2CD3-213ENST00000539061 A0A1B0GX51 115 aa12.35□□□□□ -0.43
C2CD3-213ENST00000539061 CSDC2Q9Y534 153 aaKnown RBP12.35□□□□□ -0.43
C2CD3-213ENST00000539061 USP24Q9UPU5 2620 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 J3KT08 172 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.434e-7■■■■■ 69.1
C2CD3-213ENST00000539061 LOC107984640A0A0U1RRK4 108 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 F5H768 121 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 IGHV4-59P01825 116 aa12.34□□□□□ -0.43
C2CD3-213ENST00000539061 AVPP01185 164 aa12.33□□□□□ -0.44
C2CD3-213ENST00000539061 CRPP02741 224 aa12.33□□□□□ -0.44
C2CD3-213ENST00000539061 CREBBPQ92793 2442 aa12.33□□□□□ -0.44
C2CD3-213ENST00000539061 ZFYVE26Q68DK2 2539 aa12.33□□□□□ -0.44
C2CD3-213ENST00000539061 C19orf84I3L1E1 186 aa12.32□□□□□ -0.44
C2CD3-213ENST00000539061 DNAL4O96015 105 aa12.32□□□□□ -0.44
C2CD3-213ENST00000539061 PRB1P04280 392 aa12.31□□□□□ -0.44
C2CD3-213ENST00000539061 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
C2CD3-213ENST00000539061 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
C2CD3-213ENST00000539061 DEFB112Q30KQ8 113 aa12.3□□□□□ -0.44
C2CD3-213ENST00000539061 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
C2CD3-213ENST00000539061 RPL18AQ02543 176 aaKnown RBP12.3□□□□□ -0.44
C2CD3-213ENST00000539061 LINC00337Q8N6G1 96 aa12.3□□□□□ -0.44
C2CD3-213ENST00000539061 INSP01308 110 aa12.29□□□□□ -0.44
C2CD3-213ENST00000539061 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
C2CD3-213ENST00000539061 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
C2CD3-213ENST00000539061 hADV29S1A0JD25 119 aa12.29□□□□□ -0.44
C2CD3-213ENST00000539061 RPS28P62857 69 aaKnown RBP12.29□□□□□ -0.44
C2CD3-213ENST00000539061 CCL19Q99731 98 aa12.29□□□□□ -0.44
C2CD3-213ENST00000539061 SND1-IT1Q9HBX3 110 aa12.28□□□□□ -0.44
C2CD3-213ENST00000539061 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
C2CD3-213ENST00000539061 MIR7-3HGQ8N6C7 128 aa12.28□□□□□ -0.44
C2CD3-213ENST00000539061 Q96MF0 132 aa12.28□□□□□ -0.44
C2CD3-213ENST00000539061 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
C2CD3-213ENST00000539061 Q6JHZ5 121 aa12.27□□□□□ -0.44
C2CD3-213ENST00000539061 IGKV2-28A0A075B6P5 120 aa12.27□□□□□ -0.45
C2CD3-213ENST00000539061 A0A087WYN8 130 aa12.27□□□□□ -0.45
C2CD3-213ENST00000539061 B4DSR2 109 aa12.27□□□□□ -0.45
C2CD3-213ENST00000539061 H0YGX0 51 aa12.27□□□□□ -0.45
C2CD3-213ENST00000539061 IGKV2D-28P01615 120 aa12.27□□□□□ -0.45
C2CD3-213ENST00000539061 ATP5J2P56134 94 aa12.27□□□□□ -0.45
C2CD3-213ENST00000539061 FAM19A5Q7Z5A7 132 aaPredicted RBP12.27□□□□□ -0.45
C2CD3-213ENST00000539061 SLURP1P55000 103 aa12.26□□□□□ -0.45
C2CD3-213ENST00000539061 SMIM11BQ8TCY0 68 aa12.26□□□□□ -0.45
C2CD3-213ENST00000539061 MAP6D1Q9H9H5 199 aa12.26□□□□□ -0.45
C2CD3-213ENST00000539061 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
C2CD3-213ENST00000539061 TRBV10-1A0A0K0K1A3 114 aa12.26□□□□□ -0.45
C2CD3-213ENST00000539061 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-213ENST00000539061 IGKV3D-7A0A0C4DH55 119 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms