RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HTN3P15516 51 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 FXYD2P54710 66 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 APOC4P55056 127 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 MRPL52Q86TS9 123 aaKnown RBP9.93□□□□□ -0.82
ACTN1-205ENST00000538545 AMELXQ99217 191 aa9.93□□□□□ -0.82
ACTN1-205ENST00000538545 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 TRBV6-4A0A1B0GX49 114 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 DLEU1O43261 78 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 GYPEP15421 78 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 RAB37Q96AX2 223 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 GAGE6Q13070 117 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 Q8NAQ8 132 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
ACTN1-205ENST00000538545 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
ACTN1-205ENST00000538545 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
ACTN1-205ENST00000538545 K7ERJ3 54 aa9.91□□□□□ -0.82
ACTN1-205ENST00000538545 COX6A2Q02221 97 aa9.91□□□□□ -0.82
ACTN1-205ENST00000538545 KIR2DL5BQ8NHK3 375 aa9.91□□□□□ -0.82
ACTN1-205ENST00000538545 TAX1BP3O14907 124 aa9.91□□□□□ -0.82
ACTN1-205ENST00000538545 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
ACTN1-205ENST00000538545 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
ACTN1-205ENST00000538545 LINC01549A6NIU2 74 aa9.9□□□□□ -0.82
ACTN1-205ENST00000538545 WIPF1O43516 503 aa9.9□□□□□ -0.82
ACTN1-205ENST00000538545 CBY1Q9Y3M2 126 aa9.9□□□□□ -0.82
ACTN1-205ENST00000538545 SPINK8P0C7L1 97 aa9.9□□□□□ -0.82
ACTN1-205ENST00000538545 NFE4Q86UQ8 179 aa9.9□□□□□ -0.82
ACTN1-205ENST00000538545 HSD52Q0P140 79 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 SCGB1D4Q6XE38 83 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 LINC00612Q8N6U2 182 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
ACTN1-205ENST00000538545 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 CRYBA4P53673 196 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 SBSPONQ8IVN8 264 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 SIVA1O15304 175 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 NPSP0C0P6 89 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 Q8N3U1 123 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 SMIM9A6NGZ8 99 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 J3QQQ9 107 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 DAD1P61803 113 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
ACTN1-205ENST00000538545 RNF183Q96D59 192 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 HIST1H4GQ99525 98 aa9.88□□□□□ -0.83
ACTN1-205ENST00000538545 UBE2L6O14933 153 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 HERVK_113P61574 105 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 PAPPA-AS1Q5QFB9 102 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 AMMECR1LQ6DCA0 310 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 CHCHD5Q9BSY4 110 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 TMEM243Q9BU79 118 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 UBE2D1P51668 147 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 VSIG2Q96IQ7 327 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 COX11Q9Y6N1 276 aa9.87□□□□□ -0.83
ACTN1-205ENST00000538545 DNAH3Q8TD57 4116 aa9.86□□□□□ -0.83
ACTN1-205ENST00000538545 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
ACTN1-205ENST00000538545 F5H768 121 aa9.86□□□□□ -0.83
ACTN1-205ENST00000538545 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
ACTN1-205ENST00000538545 NHP2Q9NX24 153 aaKnown RBP9.86□□□□□ -0.83
ACTN1-205ENST00000538545 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 PAX4O43316 350 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 IGHV3-30-3P0DP02 117 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 CDC42SE2Q9NRR3 84 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 HIGD1BQ9P298 99 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 LGALS3P17931 250 aaKnown RBP9.85□□□□□ -0.83
ACTN1-205ENST00000538545 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 CEND1Q8N111 149 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 OR5A1Q8NGJ0 315 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 GEMIN7Q9H840 131 aaKnown RBP9.85□□□□□ -0.83
ACTN1-205ENST00000538545 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
ACTN1-205ENST00000538545 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
ACTN1-205ENST00000538545 LYRM9A8MSI8 78 aa9.84□□□□□ -0.83
ACTN1-205ENST00000538545 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
ACTN1-205ENST00000538545 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
ACTN1-205ENST00000538545 MIFP14174 115 aa9.83□□□□□ -0.84
ACTN1-205ENST00000538545 EGFEM1PQ0D2K5 195 aa9.83□□□□□ -0.84
ACTN1-205ENST00000538545 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
ACTN1-205ENST00000538545 C10orf126Q8N4M7 172 aa9.83□□□□□ -0.84
ACTN1-205ENST00000538545 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
ACTN1-205ENST00000538545 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 H3BUT2 72 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 LEPROTO15243 131 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 SEC11AP67812 179 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 VAMP3Q15836 100 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 MRAPQ8TCY5 172 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-205ENST00000538545 MDFIQ99750 246 aa9.82□□□□□ -0.84
ACTN1-205ENST00000538545 SPART-AS1P0CW21 52 aa9.81□□□□□ -0.84
ACTN1-205ENST00000538545 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
ACTN1-205ENST00000538545 ATP5G1P05496 136 aa9.8□□□□□ -0.84
ACTN1-205ENST00000538545 NPC2P61916 151 aa9.8□□□□□ -0.84
ACTN1-205ENST00000538545 A0A0U1RRA0 63 aa9.8□□□□□ -0.84
ACTN1-205ENST00000538545 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 A6NDN8 102 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 CCL25O15444 150 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 CIDEAO60543 219 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms