RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 C9orf85Q96MD7 179 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 MLST8Q9BVC4 326 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 TNCP24821 2201 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 A0A1B0GXF2 115 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 TDRG1Q3Y452 100 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 COL4A2P08572 1712 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 NPSP0C0P6 89 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 FXYD2P54710 66 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 HRCT1Q6UXD1 115 aa3.92□□□□□ -1.78
LRP6-203ENST00000538239 ANKHD1Q8IWZ3 2542 aaKnown RBP3.92□□□□□ -1.78
LRP6-203ENST00000538239 A0A0J9YXY3 114 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 K7EP13 123 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 Q6ZTC4 211 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 PPDPFQ9H3Y8 114 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 H3BQ85 93 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 RNF185Q96GF1 192 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 C11orf21Q9P2W6 132 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 IGKV3D-7A0A0C4DH55 119 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 KLLNB2CW77 178 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 WNK1Q9H4A3 2382 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 MRGPRG-AS1Q2M3A8 158 aa3.91□□□□□ -1.78
LRP6-203ENST00000538239 TMEM223A0PJW6 202 aa3.9□□□□□ -1.78
LRP6-203ENST00000538239 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.78
LRP6-203ENST00000538239 PIK3CD-AS1Q5SR53 167 aa3.9□□□□□ -1.78
LRP6-203ENST00000538239 SPG11Q96JI7 2443 aa3.9□□□□□ -1.78
LRP6-203ENST00000538239 IGKV2D-26A0A0A0MRZ7 120 aa3.9□□□□□ -1.78
LRP6-203ENST00000538239 A8MZ25 164 aa3.9□□□□□ -1.78
LRP6-203ENST00000538239 TSHBP01222 138 aa3.9□□□□□ -1.78
LRP6-203ENST00000538239 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 LOC107984640A0A0U1RRK4 108 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 LINC00959A0A1B0GUT2 108 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 IGLV4-69A0A075B6H9 119 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 TMEM256-PLSCR3K7ERE1 68 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 CD164L2Q6UWJ8 174 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 CSPG4Q6UVK1 2322 aa3.9□□□□□ -1.79
LRP6-203ENST00000538239 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
LRP6-203ENST00000538239 UBE2D4Q9Y2X8 147 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 SLPIP03973 132 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 LINC01620Q4KN68 170 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 ACACBO00763 2458 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 SPANXCQ9NY87 97 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 PTPRBP23467 1997 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 PLAC8L1A1L4L8 177 aa3.89□□□□□ -1.79
LRP6-203ENST00000538239 CRIP2P52943 208 aaPredicted RBP3.89□□□□□ -1.79
LRP6-203ENST00000538239 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 DSCAML1Q8TD84 2053 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 C14orf132Q9NPU4 83 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 HIGD1BQ9P298 99 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 A0A1B0GX51 115 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 UBE2D3P61077 147 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
LRP6-203ENST00000538239 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 IBA57-AS1B1ANH7 110 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 IGF2RP11717 2491 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 NCOR2Q9Y618 2525 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 NOTCH2Q04721 2471 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 TRAV23DV6A0A075B6W5 121 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 A0A0B4J2C4 111 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 UBE2D2P62837 147 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 C1orf158Q8N1D5 194 aa3.88□□□□□ -1.79
LRP6-203ENST00000538239 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 PLXNB1O43157 2135 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 SPINK6Q6UWN8 80 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 SPANXB1Q9NS25 103 aaPredicted RBP3.87□□□□□ -1.79
LRP6-203ENST00000538239 TRBV27A0A0K0K1C4 114 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 IGKV4-1P06312 121 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 NRACQ8N912 160 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 KRTAP24-1Q3LI83 254 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 PIEZO2Q9H5I5 2752 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 MP68P56378 58 aa3.87□□□□□ -1.79
LRP6-203ENST00000538239 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 LINC00474Q9P2X8 69 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
LRP6-203ENST00000538239 ZNF706Q9Y5V0 76 aaPredicted RBP3.86□□□□□ -1.79
LRP6-203ENST00000538239 ACYP1P07311 99 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 FHL2Q14192 279 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 WFDC9Q8NEX5 89 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 FHL3Q13643 280 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 MRPS12O15235 138 aaKnown RBP3.86□□□□□ -1.79
LRP6-203ENST00000538239 PYGO1Q9Y3Y4 419 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 M0R378 163 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
LRP6-203ENST00000538239 M0QXV9 152 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 SCXQ7RTU7 201 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 TET2Q6N021 2002 aaPredicted RBP3.85□□□□□ -1.79
LRP6-203ENST00000538239 CDC42SE2Q9NRR3 84 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 TCL1BO95988 128 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 WFDC2Q14508 124 aa3.85□□□□□ -1.79
LRP6-203ENST00000538239 WFDC10BQ8IUB3 73 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms