RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 DEFB104AQ8WTQ1 72 aa9.71□□□□□ -0.86
LRRK1-211ENST00000538064 C20orf78Q9BR46 151 aa9.71□□□□□ -0.86
LRRK1-211ENST00000538064 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 D6R8Y8 96 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 H7C423 109 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 SNAPINO95295 136 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 KRTAP26-1Q6PEX3 210 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 ORMDL3Q8N138 153 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 CHAC1Q9BUX1 264 aa9.7□□□□□ -0.86
LRRK1-211ENST00000538064 A0A1B0GUV1 79 aa9.69□□□□□ -0.86
LRRK1-211ENST00000538064 PHOX2AO14813 284 aa9.69□□□□□ -0.86
LRRK1-211ENST00000538064 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
LRRK1-211ENST00000538064 FCER1GP30273 86 aa9.69□□□□□ -0.86
LRRK1-211ENST00000538064 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
LRRK1-211ENST00000538064 TCAPO15273 167 aa9.68□□□□□ -0.86
LRRK1-211ENST00000538064 RPL32P62910 135 aaKnown RBP9.68□□□□□ -0.86
LRRK1-211ENST00000538064 REG3AQ06141 175 aa9.68□□□□□ -0.86
LRRK1-211ENST00000538064 AMMECR1LQ6DCA0 310 aa9.68□□□□□ -0.86
LRRK1-211ENST00000538064 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
LRRK1-211ENST00000538064 PKHD1L1Q86WI1 4243 aa9.67□□□□□ -0.86
LRRK1-211ENST00000538064 TSHBP01222 138 aa9.67□□□□□ -0.86
LRRK1-211ENST00000538064 PRSS1P07477 247 aa9.67□□□□□ -0.86
LRRK1-211ENST00000538064 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
LRRK1-211ENST00000538064 PRELID3AQ96N28 172 aa9.67□□□□□ -0.86
LRRK1-211ENST00000538064 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
LRRK1-211ENST00000538064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
LRRK1-211ENST00000538064 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
LRRK1-211ENST00000538064 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
LRRK1-211ENST00000538064 NPYP01303 97 aa9.66□□□□□ -0.86
LRRK1-211ENST00000538064 ESDP10768 282 aa9.66□□□□□ -0.86
LRRK1-211ENST00000538064 SMAGPQ0VAQ4 97 aa9.66□□□□□ -0.86
LRRK1-211ENST00000538064 COX19Q49B96 90 aa9.66□□□□□ -0.86
LRRK1-211ENST00000538064 RNASEKQ6P5S7 137 aaKnown RBP9.66□□□□□ -0.86
LRRK1-211ENST00000538064 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.86
LRRK1-211ENST00000538064 IGLV10-54A0A075B6I4 117 aa9.65□□□□□ -0.86
LRRK1-211ENST00000538064 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
LRRK1-211ENST00000538064 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.86
LRRK1-211ENST00000538064 TMEM101Q96IK0 257 aa9.65□□□□□ -0.86
LRRK1-211ENST00000538064 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
LRRK1-211ENST00000538064 FGF6P10767 208 aa9.64□□□□□ -0.87
LRRK1-211ENST00000538064 TMEM18Q96B42 140 aa9.64□□□□□ -0.87
LRRK1-211ENST00000538064 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
LRRK1-211ENST00000538064 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
LRRK1-211ENST00000538064 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
LRRK1-211ENST00000538064 C9orf163Q8N9P6 203 aa9.63□□□□□ -0.87
LRRK1-211ENST00000538064 PRSS47A8MTI9 375 aa9.62□□□□□ -0.87
LRRK1-211ENST00000538064 MT-ND6P03923 174 aa9.62□□□□□ -0.87
LRRK1-211ENST00000538064 RAB5AP20339 215 aa9.62□□□□□ -0.87
LRRK1-211ENST00000538064 CNBPP62633 177 aaKnown RBP9.62□□□□□ -0.87
LRRK1-211ENST00000538064 SLC7A5P1Q8MH63 180 aa9.62□□□□□ -0.87
LRRK1-211ENST00000538064 OR5A1Q8NGJ0 315 aa9.62□□□□□ -0.87
LRRK1-211ENST00000538064 FAT3Q8TDW7 4589 aa9.61□□□□□ -0.87
LRRK1-211ENST00000538064 MRPL52Q86TS9 123 aaKnown RBP9.61□□□□□ -0.87
LRRK1-211ENST00000538064 LOC389332A0A1B0GUA5 103 aa9.6□□□□□ -0.87
LRRK1-211ENST00000538064 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
LRRK1-211ENST00000538064 J3QL48 77 aa9.6□□□□□ -0.87
LRRK1-211ENST00000538064 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
LRRK1-211ENST00000538064 Q8N8P6 123 aa9.59□□□□□ -0.87
LRRK1-211ENST00000538064 CSDC2Q9Y534 153 aaKnown RBP9.59□□□□□ -0.87
LRRK1-211ENST00000538064 LRP1Q07954 4544 aaKnown RBP9.59□□□□□ -0.87
LRRK1-211ENST00000538064 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
LRRK1-211ENST00000538064 K7EMI3 77 aa9.58□□□□□ -0.88
LRRK1-211ENST00000538064 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
LRRK1-211ENST00000538064 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
LRRK1-211ENST00000538064 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
LRRK1-211ENST00000538064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.58□□□□□ -0.88
LRRK1-211ENST00000538064 TGIF2-C20orf24A0A0A6YYL0 155 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 FABP9Q0Z7S8 132 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 SDIM1Q6ZPB5 146 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 ZNF664Q8N3J9 261 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 MRPL18Q9H0U6 180 aaKnown RBP9.57□□□□□ -0.88
LRRK1-211ENST00000538064 CDC42SE2Q9NRR3 84 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
LRRK1-211ENST00000538064 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
LRRK1-211ENST00000538064 GAGE12HA6NDE8 117 aa9.56□□□□□ -0.88
LRRK1-211ENST00000538064 PANO1I0J062 215 aa9.56□□□□□ -0.88
LRRK1-211ENST00000538064 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
LRRK1-211ENST00000538064 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
LRRK1-211ENST00000538064 C15orf56Q8N910 161 aa9.56□□□□□ -0.88
LRRK1-211ENST00000538064 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
LRRK1-211ENST00000538064 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
LRRK1-211ENST00000538064 IGHV3-64A0A075B6Q5 118 aa9.55□□□□□ -0.88
LRRK1-211ENST00000538064 G0S2P27469 103 aa9.55□□□□□ -0.88
LRRK1-211ENST00000538064 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
LRRK1-211ENST00000538064 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
LRRK1-211ENST00000538064 SLPIP03973 132 aa9.54□□□□□ -0.88
LRRK1-211ENST00000538064 RPL39P62891 51 aaKnown RBP9.54□□□□□ -0.88
LRRK1-211ENST00000538064 SS18Q15532 418 aa9.54□□□□□ -0.88
LRRK1-211ENST00000538064 PRSS3P2Q8NHM4 247 aa9.54□□□□□ -0.88
LRRK1-211ENST00000538064 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
LRRK1-211ENST00000538064 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
LRRK1-211ENST00000538064 CCL25O15444 150 aa9.53□□□□□ -0.88
LRRK1-211ENST00000538064 IFI27P40305 119 aaPredicted RBP9.53□□□□□ -0.88
LRRK1-211ENST00000538064 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
LRRK1-211ENST00000538064 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
LRRK1-211ENST00000538064 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
LRRK1-211ENST00000538064 CYSLTR1Q9Y271 337 aa9.52□□□□□ -0.89
LRRK1-211ENST00000538064 C1orf196B1AJZ1 125 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms