RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 LINC00308Q8TCZ7 52 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 IGKV2D-24A0A075B6R9 120 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 C20orf203Q8NBC4 194 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 DEFB136Q30KP8 78 aa4.31□□□□□ -1.72
CSMD1-215ENST00000537824 CTSGP08311 255 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 C22orf34Q6ZV56 151 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 RNF185Q96GF1 192 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 MBD3L4A6NDZ8 208 aaPredicted RBP4.3□□□□□ -1.72
CSMD1-215ENST00000537824 MBD3L3A6NE82 208 aaPredicted RBP4.3□□□□□ -1.72
CSMD1-215ENST00000537824 MBD3L5A6NJ08 208 aaPredicted RBP4.3□□□□□ -1.72
CSMD1-215ENST00000537824 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 A8MZ25 164 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 C3orf84H3BNL1 204 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 P0C879 139 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 CDKN2A-AS1Q9UH64 79 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 TRBV6-5A0A0K0K1A5 114 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 POM121L12Q8N7R1 296 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 FAM30AQ9NZY2 134 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 VPREB1P12018 145 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 AJUBAQ96IF1 538 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 THSD7BQ9C0I4 1608 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 MED14OSP0DP75 135 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 ZNF295-AS1Q8N0V1 137 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 CGB3P0DN86 165 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 CGB7P0DN87 165 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 SIRPDQ9H106 197 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 HOXB4P17483 251 aaPredicted RBP4.3□□□□□ -1.72
CSMD1-215ENST00000537824 IGKV1D-37A0A075B6S9 117 aa4.3□□□□□ -1.72
CSMD1-215ENST00000537824 ZNF80P51504 273 aaPredicted RBP4.29□□□□□ -1.72
CSMD1-215ENST00000537824 IGLV11-55A0A075B6I3 123 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 Q6ZS46 218 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 DSCR9P59020 149 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
CSMD1-215ENST00000537824 CDIP1Q9H305 208 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 NRACQ8N912 160 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 SPRNQ5BIV9 151 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 C17orf82Q86X59 251 aaPredicted RBP4.29□□□□□ -1.72
CSMD1-215ENST00000537824 ODF3L1Q8IXM7 274 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
CSMD1-215ENST00000537824 TEX15Q9BXT5 2789 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 ZFAND3Q9H8U3 227 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 CELA1Q9UNI1 258 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 APOC4P55056 127 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 PRORYQ9H606 182 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 LHBP01229 141 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 APRG1Q8IVJ8 170 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 LINC01356Q8N9X3 169 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 BPESC1Q9GZL8 116 aa4.28□□□□□ -1.72
CSMD1-215ENST00000537824 IGHV7-81A0A0B4J1V7 117 aa4.28□□□□□ -1.73
CSMD1-215ENST00000537824 IGLV2-23P01705 113 aa4.28□□□□□ -1.73
CSMD1-215ENST00000537824 C1orf158Q8N1D5 194 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 C16orf74Q96GX8 76 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 ITPR2Q14571 2701 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 A0A087WVE0 104 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 CRIP1P50238 77 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 SLURP1P55000 103 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 IGLV1-44P01699 117 aa4.27□□□□□ -1.73
CSMD1-215ENST00000537824 GAS8-AS1O95177 125 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 IGHV4-30-4P0DP06 118 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 IGHV4-31P0DP07 118 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 E7EUB6 86 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 EBI3Q14213 229 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 DKK4Q9UBT3 224 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 H3BUA1 57 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 CCKP06307 115 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 UTP20O75691 2785 aaKnown RBP4.26□□□□□ -1.73
CSMD1-215ENST00000537824 UBE2D3P61077 147 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 UBE2D2P62837 147 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 IGF1P05019 195 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 MAPK1IP1LQ8NDC0 245 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 DEFB112Q30KQ8 113 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 FAM19A1Q7Z5A9 133 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 PYGO1Q9Y3Y4 419 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 CENPFP49454 3210 aa4.26□□□□□ -1.73
CSMD1-215ENST00000537824 PRYO14603 147 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 MSMBP08118 114 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 TSHBP01222 138 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 IGLV2-11P01706 119 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 SP5Q6BEB4 398 aaPredicted RBP4.25□□□□□ -1.73
CSMD1-215ENST00000537824 WFDC10AQ9H1F0 79 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 MYCNOSP40205 109 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
CSMD1-215ENST00000537824 UBE2D1P51668 147 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 DEFB121Q5J5C9 76 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 ITPR1Q14643 2758 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 CRYGAP11844 174 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 CRIP2P52943 208 aaPredicted RBP4.24□□□□□ -1.73
CSMD1-215ENST00000537824 SMIM11BQ8TCY0 68 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 CTSZQ9UBR2 303 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 KLK12Q9UKR0 248 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 DCANP1Q8TF63 244 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms