RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CENPEQ02224 2701 aa1.13□□□□□ -2.23
PRKDC-208ENST00000536710 ITPR2Q14571 2701 aa1.13□□□□□ -2.23
PRKDC-208ENST00000536710 KNL1Q8NG31 2342 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 USP9XQ93008 2570 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-208ENST00000536710 APCP25054 2843 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 URB1O60287 2271 aaKnown RBP1.12□□□□□ -2.23
PRKDC-208ENST00000536710 CXorf51AA0A1B0GTR3 108 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 A6NN06 94 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 C9JAW5 83 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 CAV3P56539 151 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 IQCJQ1A5X6 159 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 TMEM244Q5VVB8 128 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 Q5XG85 94 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 BANF2Q9H503 90 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 HIGD1AQ9Y241 93 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 HRNRQ86YZ3 2850 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-208ENST00000536710 GOLGA4Q13439 2230 aaKnown RBP1.12□□□□□ -2.23
PRKDC-208ENST00000536710 FLNBO75369 2602 aaKnown RBP1.12□□□□□ -2.23
PRKDC-208ENST00000536710 UNC79Q9P2D8 2635 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 HECTD1Q9ULT8 2610 aa1.12□□□□□ -2.23
PRKDC-208ENST00000536710 TLN1Q9Y490 2541 aaKnown RBP1.12□□□□□ -2.23
PRKDC-208ENST00000536710 NF1P21359 2839 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 USP9YO00507 2555 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-208ENST00000536710 KNTC1P50748 2209 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 SPTY2D1-AS1A0A0U1RR47 76 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 K7EIL1 84 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 TPST1O60507 370 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 SMIM24O75264 130 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 PRB4P10163 310 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-208ENST00000536710 RHOHQ15669 191 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 XAF1Q6GPH4 301 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 NAV2Q8IVL1 2488 aa1.11□□□□□ -2.23
PRKDC-208ENST00000536710 LRRK2Q5S007 2527 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 A0A1B0GW64 132 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 SCTP09683 121 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 ASB16-AS1Q495Z4 193 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 LYPD5Q6UWN5 251 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 ATOH7Q8N100 152 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 METTL1Q9UBP6 276 aaKnown RBP1.1□□□□□ -2.23
PRKDC-208ENST00000536710 JPT1Q9UK76 154 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 CUBNO60494 3623 aa1.1□□□□□ -2.23
PRKDC-208ENST00000536710 ABCA12Q86UK0 2595 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 HIVEP3Q5T1R4 2406 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 DOPEY1Q5JWR5 2465 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 BORCS7-ASMTA0A0B4J1R7 106 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 A0A0G2JMM0 328 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 OR2H2O95918 312 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 DBIP07108 87 aaKnown RBP1.09□□□□□ -2.23
PRKDC-208ENST00000536710 FXYD6P3P58550 94 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 DEFB133Q30KQ1 61 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 UNQ5815/PRO19632Q6UWF5 114 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 DEFB106AQ8N104 65 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 PLAC4Q8WY50 150 aa1.09□□□□□ -2.23
PRKDC-208ENST00000536710 MRPL35Q9NZE8 188 aaKnown RBP1.09□□□□□ -2.23
PRKDC-208ENST00000536710 ANKRD17O75179 2603 aaKnown RBP1.09□□□□□ -2.24
PRKDC-208ENST00000536710 AHCTF1Q8WYP5 2266 aa1.09□□□□□ -2.24
PRKDC-208ENST00000536710 HIVEP1P15822 2718 aa1.09□□□□□ -2.24
PRKDC-208ENST00000536710 NIPBLQ6KC79 2804 aaeCLIP1.08□□□□□ -2.24
PRKDC-208ENST00000536710 HIGD1CA8MV81 97 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 IGF2P01344 180 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 SCGB1A1P11684 91 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 ADCYAP1P18509 176 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 KDELR1P24390 212 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 ZNF137PP52743 207 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 C6orf52Q5T4I8 152 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 OR4S1Q8NGB4 309 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 COX14Q96I36 57 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 SLC35B3Q9H1N7 401 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 BATF3Q9NR55 127 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 TEP1Q99973 2627 aaKnown RBP1.08□□□□□ -2.24
PRKDC-208ENST00000536710 SPTA1P02549 2419 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 SPTAN1Q13813 2472 aaKnown RBP1.08□□□□□ -2.24
PRKDC-208ENST00000536710 DNHD1Q96M86 4753 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 MYO9AB2RTY4 2548 aa1.08□□□□□ -2.24
PRKDC-208ENST00000536710 MAP1AP78559 2803 aaPredicted RBP1.07□□□□□ -2.24
PRKDC-208ENST00000536710 SPTBP11277 2137 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 LOC101927531A0A1B0GV80 90 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 EVI2AP22794 236 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 POLR2JP52435 117 aaKnown RBP1.07□□□□□ -2.24
PRKDC-208ENST00000536710 NCBP2-AS2Q69YL0 99 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 TMEM91Q6ZNR0 172 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 MAGOHBQ96A72 148 aaKnown RBP1.07□□□□□ -2.24
PRKDC-208ENST00000536710 DMAC1Q96GE9 116 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 SNRNP25Q9BV90 132 aaKnown RBP1.07□□□□□ -2.24
PRKDC-208ENST00000536710 ATG5Q9H1Y0 275 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 ZANQ9Y493 2812 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 CACNA1CQ13936 2221 aa1.07□□□□□ -2.24
PRKDC-208ENST00000536710 NBASA2RRP1 2371 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 SPTBN1Q01082 2364 aaKnown RBP1.06□□□□□ -2.24
PRKDC-208ENST00000536710 NSD1Q96L73 2696 aaPredicted RBP1.06□□□□□ -2.24
PRKDC-208ENST00000536710 ESPL1Q14674 2120 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 ZGRF1Q86YA3 2104 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 MED13LQ71F56 2210 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 TRAV17A0A0B4J275 112 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 LOC285095A0A1B0GVY8 99 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 TNFP01375 233 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 CD3DP04234 171 aa1.06□□□□□ -2.24
PRKDC-208ENST00000536710 PLGLB1Q02325 96 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms