RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 FAM104AQ969W3 186 aa7.44□□□□□ -1.22
TNFRSF1A-208ENST00000536194 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
TNFRSF1A-208ENST00000536194 PGPEP1Q9NXJ5 209 aa7.44□□□□□ -1.22
TNFRSF1A-208ENST00000536194 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
TNFRSF1A-208ENST00000536194 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
TNFRSF1A-208ENST00000536194 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
TNFRSF1A-208ENST00000536194 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
TNFRSF1A-208ENST00000536194 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
TNFRSF1A-208ENST00000536194 DNAH5Q8TE73 4624 aa7.43□□□□□ -1.22
TNFRSF1A-208ENST00000536194 COX19Q49B96 90 aa7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 RNASE13Q5GAN3 156 aaKnown RBP7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 Q6ZUT4 128 aa7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 ZNF664Q8N3J9 261 aa7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 Q8N8P6 123 aa7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 TMEM101Q96IK0 257 aa7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 TIMM21Q9BVV7 248 aa7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
TNFRSF1A-208ENST00000536194 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 USP17L23D6RBM5 183 aa7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 MT-ND6P03923 174 aa7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 KRTAP10-1P60331 282 aa7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 NTN5Q8WTR8 489 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 CHCHD10Q8WYQ3 142 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 OPRPNQ99935 248 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 ALKBH7Q9BT30 221 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
TNFRSF1A-208ENST00000536194 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 GAGE12HA6NDE8 117 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 RAB5AP20339 215 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 CBLN2Q8IUK8 224 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 TMEM18Q96B42 140 aa7.4□□□□□ -1.22
TNFRSF1A-208ENST00000536194 PRSS1P07477 247 aa7.39□□□□□ -1.23
TNFRSF1A-208ENST00000536194 FOXI1Q12951 378 aa7.39□□□□□ -1.23
TNFRSF1A-208ENST00000536194 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
TNFRSF1A-208ENST00000536194 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
TNFRSF1A-208ENST00000536194 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
TNFRSF1A-208ENST00000536194 CCL25O15444 150 aa7.38□□□□□ -1.23
TNFRSF1A-208ENST00000536194 GCSHP23434 173 aa7.38□□□□□ -1.23
TNFRSF1A-208ENST00000536194 XCL1P47992 114 aa7.38□□□□□ -1.23
TNFRSF1A-208ENST00000536194 LINC01620Q4KN68 170 aa7.38□□□□□ -1.23
TNFRSF1A-208ENST00000536194 TRAPPC1Q9Y5R8 145 aa7.38□□□□□ -1.23
TNFRSF1A-208ENST00000536194 LINC01546A6NGU7 62 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 K7EMI3 77 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 MRPS36P82909 103 aaKnown RBP7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 ORMDL2Q53FV1 153 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 C2orf66Q6UXQ4 117 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 C15orf56Q8N910 161 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 PYGO1Q9Y3Y4 419 aa7.37□□□□□ -1.23
TNFRSF1A-208ENST00000536194 IGLV4-3A0A075B6K6 122 aa7.36□□□□□ -1.23
TNFRSF1A-208ENST00000536194 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
TNFRSF1A-208ENST00000536194 SS18Q15532 418 aa7.36□□□□□ -1.23
TNFRSF1A-208ENST00000536194 C14orf177Q52M58 125 aa7.36□□□□□ -1.23
TNFRSF1A-208ENST00000536194 SMCO4Q9NRQ5 59 aa7.36□□□□□ -1.23
TNFRSF1A-208ENST00000536194 C1orf196B1AJZ1 125 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 SLPIP03973 132 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 LINC00173Q6ZV60 143 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 PRSS3P2Q8NHM4 247 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 CYSLTR1Q9Y271 337 aa7.35□□□□□ -1.23
TNFRSF1A-208ENST00000536194 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
TNFRSF1A-208ENST00000536194 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
TNFRSF1A-208ENST00000536194 IGIPA6NJ69 53 aa7.34□□□□□ -1.23
TNFRSF1A-208ENST00000536194 XGP55808 180 aa7.34□□□□□ -1.23
TNFRSF1A-208ENST00000536194 ZC2HC1BQ5TFG8 222 aa7.34□□□□□ -1.23
TNFRSF1A-208ENST00000536194 TOMM6Q96B49 74 aa7.34□□□□□ -1.23
TNFRSF1A-208ENST00000536194 IFITM10A6NMD0 228 aa7.33□□□□□ -1.24
TNFRSF1A-208ENST00000536194 HAMPP81172 84 aa7.33□□□□□ -1.24
TNFRSF1A-208ENST00000536194 HIGD2BQ4VC39 106 aa7.33□□□□□ -1.24
TNFRSF1A-208ENST00000536194 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
TNFRSF1A-208ENST00000536194 RYR1P21817 5038 aa7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 HERC2O95714 4834 aa7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 GVQW2A0A096LPI5 108 aaPredicted RBP7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 Q6ZSA8 131 aa7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 FA2HQ7L5A8 372 aa7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 AMELXQ99217 191 aa7.32□□□□□ -1.24
TNFRSF1A-208ENST00000536194 HSPG2P98160 4391 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 A0A096LNJ9 63 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 COLCA2A8K830 154 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 SCO1O75880 301 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 TIMM17AQ99595 171 aa7.31□□□□□ -1.24
TNFRSF1A-208ENST00000536194 IGHV1-58A0A0C4DH39 117 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 COX7A2LO14548 114 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 TRGC2P03986 189 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 NPSP0C0P6 89 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 LINC00614P0C842 121 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 UBE2D1P51668 147 aa7.3□□□□□ -1.24
TNFRSF1A-208ENST00000536194 COX6A2Q02221 97 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms