RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 A0A1B0GXF2 115 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 D6R8Y8 96 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 PHOX2AO14813 284 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 G0S2P27469 103 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 SUMO2P61956 95 aaKnown RBP7.27□□□□□ -1.25
LMO3-213ENST00000536172 Q0VG73 95 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 FABP9Q0Z7S8 132 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 MRPL51Q4U2R6 128 aaKnown RBP7.27□□□□□ -1.25
LMO3-213ENST00000536172 DGAT2L7PQ6IED9 249 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 ATRAIDQ6UW56 229 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 NIT1Q86X76 327 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 RPL39LQ96EH5 51 aaKnown RBP7.27□□□□□ -1.25
LMO3-213ENST00000536172 TMEM101Q96IK0 257 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 GNB1LQ9BYB4 327 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 MAP1LC3AQ9H492 121 aa7.27□□□□□ -1.25
LMO3-213ENST00000536172 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
LMO3-213ENST00000536172 CRPP02741 224 aa7.26□□□□□ -1.25
LMO3-213ENST00000536172 KRTAP10-4P60372 401 aaPredicted RBP7.26□□□□□ -1.25
LMO3-213ENST00000536172 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
LMO3-213ENST00000536172 RNF185Q96GF1 192 aa7.26□□□□□ -1.25
LMO3-213ENST00000536172 SMKR1H3BMG3 65 aa7.25□□□□□ -1.25
LMO3-213ENST00000536172 TNFRSF6BO95407 300 aa7.25□□□□□ -1.25
LMO3-213ENST00000536172 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
LMO3-213ENST00000536172 RNASEKQ6P5S7 137 aaKnown RBP7.25□□□□□ -1.25
LMO3-213ENST00000536172 KLK12Q9UKR0 248 aa7.25□□□□□ -1.25
LMO3-213ENST00000536172 PLA2G2DQ9UNK4 145 aa7.25□□□□□ -1.25
LMO3-213ENST00000536172 TRAPPC1Q9Y5R8 145 aa7.25□□□□□ -1.25
LMO3-213ENST00000536172 H7C423 109 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 ANGP03950 147 aaKnown RBP7.24□□□□□ -1.25
LMO3-213ENST00000536172 GAGE6Q13070 117 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 IQCJQ1A5X6 159 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 PRSS3P2Q8NHM4 247 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 UBE2WQ96B02 151 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 C1orf43Q9BWL3 253 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 Q9UF83 564 aa7.24□□□□□ -1.25
LMO3-213ENST00000536172 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
LMO3-213ENST00000536172 TRBV24-1A0A075B6N3 115 aa7.23□□□□□ -1.25
LMO3-213ENST00000536172 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
LMO3-213ENST00000536172 LOC389332A0A1B0GUA5 103 aa7.23□□□□□ -1.25
LMO3-213ENST00000536172 S100A1P23297 94 aa7.23□□□□□ -1.25
LMO3-213ENST00000536172 MRPL18Q9H0U6 180 aaKnown RBP7.23□□□□□ -1.25
LMO3-213ENST00000536172 TGIF2-C20orf24A0A0A6YYL0 155 aa7.22□□□□□ -1.25
LMO3-213ENST00000536172 SMIM2Q9BVW6 85 aa7.22□□□□□ -1.25
LMO3-213ENST00000536172 NXT2Q9NPJ8 142 aaKnown RBP7.22□□□□□ -1.25
LMO3-213ENST00000536172 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.26
LMO3-213ENST00000536172 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.26
LMO3-213ENST00000536172 RAB5BP61020 215 aa7.21□□□□□ -1.26
LMO3-213ENST00000536172 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
LMO3-213ENST00000536172 RPL32P62910 135 aaKnown RBP7.21□□□□□ -1.26
LMO3-213ENST00000536172 ORMDL2Q53FV1 153 aa7.21□□□□□ -1.26
LMO3-213ENST00000536172 FA2HQ7L5A8 372 aa7.21□□□□□ -1.26
LMO3-213ENST00000536172 OR5A1Q8NGJ0 315 aa7.21□□□□□ -1.26
LMO3-213ENST00000536172 K7EMI3 77 aa7.2□□□□□ -1.26
LMO3-213ENST00000536172 NPYP01303 97 aa7.2□□□□□ -1.26
LMO3-213ENST00000536172 ZNF25P17030 456 aaPredicted RBP7.2□□□□□ -1.26
LMO3-213ENST00000536172 KIAA1644Q3SXP7 199 aa7.2□□□□□ -1.26
LMO3-213ENST00000536172 NRACQ8N912 160 aa7.2□□□□□ -1.26
LMO3-213ENST00000536172 A0A1B0GUV1 79 aa7.19□□□□□ -1.26
LMO3-213ENST00000536172 RBX1P62877 108 aa7.19□□□□□ -1.26
LMO3-213ENST00000536172 MIAQ16674 131 aa7.19□□□□□ -1.26
LMO3-213ENST00000536172 NTM-AS1Q6ZSK4 140 aa7.19□□□□□ -1.26
LMO3-213ENST00000536172 Q8N8P6 123 aa7.19□□□□□ -1.26
LMO3-213ENST00000536172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.18□□□□□ -1.26
LMO3-213ENST00000536172 IGKV2-29A2NJV5 120 aaPredicted RBP7.18□□□□□ -1.26
LMO3-213ENST00000536172 LINC01549A6NIU2 74 aa7.18□□□□□ -1.26
LMO3-213ENST00000536172 TSHBP01222 138 aa7.18□□□□□ -1.26
LMO3-213ENST00000536172 FGF6P10767 208 aa7.18□□□□□ -1.26
LMO3-213ENST00000536172 PAPPA-AS1Q5QFB9 102 aa7.18□□□□□ -1.26
LMO3-213ENST00000536172 ENHOQ6UWT2 76 aa7.18□□□□□ -1.26
LMO3-213ENST00000536172 CBLN2Q8IUK8 224 aa7.18□□□□□ -1.26
LMO3-213ENST00000536172 TRAV8-4A0A0B4J246 113 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 USP17L23D6RBM5 183 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 GAS8-AS1O95177 125 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 IFI27P40305 119 aaPredicted RBP7.17□□□□□ -1.26
LMO3-213ENST00000536172 MPV17L2Q567V2 206 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 Q6ZN92 141 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 LINC00269Q8N2A0 174 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 C9orf163Q8N9P6 203 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 CYSLTR1Q9Y271 337 aa7.17□□□□□ -1.26
LMO3-213ENST00000536172 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
LMO3-213ENST00000536172 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
LMO3-213ENST00000536172 REG3AQ06141 175 aa7.16□□□□□ -1.26
LMO3-213ENST00000536172 SS18Q15532 418 aa7.16□□□□□ -1.26
LMO3-213ENST00000536172 Q6ZRU5 148 aa7.16□□□□□ -1.26
LMO3-213ENST00000536172 ALKBH7Q9BT30 221 aaPredicted RBP7.16□□□□□ -1.26
LMO3-213ENST00000536172 EIF4EBP3O60516 100 aaPredicted RBP7.15□□□□□ -1.26
LMO3-213ENST00000536172 PRSS1P07477 247 aa7.15□□□□□ -1.26
LMO3-213ENST00000536172 BAGE3Q86Y29 109 aa7.15□□□□□ -1.26
LMO3-213ENST00000536172 C20orf203Q8NBC4 194 aa7.15□□□□□ -1.26
LMO3-213ENST00000536172 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
LMO3-213ENST00000536172 PRR34Q9NV39 138 aa7.15□□□□□ -1.26
LMO3-213ENST00000536172 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
LMO3-213ENST00000536172 CCL25O15444 150 aa7.14□□□□□ -1.27
LMO3-213ENST00000536172 ESDP10768 282 aa7.14□□□□□ -1.27
LMO3-213ENST00000536172 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
LMO3-213ENST00000536172 CLPSL2Q6UWE3 100 aa7.14□□□□□ -1.27
LMO3-213ENST00000536172 MRPL52Q86TS9 123 aaKnown RBP7.14□□□□□ -1.27
LMO3-213ENST00000536172 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
LMO3-213ENST00000536172 C2orf88Q9BSF0 95 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms