RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 D6R8Y8 96 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 RTL8CO15255 209 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 SERF1AO75920 110 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
CHD4-203ENST00000535717 C1orf134Q5TEV5 83 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 C6orf223Q8N319 242 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 STPG4Q8N801 248 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 TMEM70Q9BUB7 260 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.1
CHD4-203ENST00000535717 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
CHD4-203ENST00000535717 NUPR1O60356 82 aa8.15□□□□□ -1.1
CHD4-203ENST00000535717 PPP1R17O96001 155 aa8.15□□□□□ -1.1
CHD4-203ENST00000535717 TMEM136Q6ZRR5 245 aa8.15□□□□□ -1.1
CHD4-203ENST00000535717 CHCHD5Q9BSY4 110 aa8.15□□□□□ -1.1
CHD4-203ENST00000535717 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
CHD4-203ENST00000535717 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
CHD4-203ENST00000535717 I3L3M4 83 aa8.14□□□□□ -1.11
CHD4-203ENST00000535717 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
CHD4-203ENST00000535717 PMCHP20382 165 aa8.14□□□□□ -1.11
CHD4-203ENST00000535717 SUMO2P61956 95 aaKnown RBP8.14□□□□□ -1.11
CHD4-203ENST00000535717 C10orf126Q8N4M7 172 aa8.14□□□□□ -1.11
CHD4-203ENST00000535717 TMEM243Q9BU79 118 aa8.14□□□□□ -1.11
CHD4-203ENST00000535717 A0A087WX48 190 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 IBA57-AS1B1ANH7 110 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 TMEM262E9PQX1 116 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 VCYO14598 125 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 TSHBP01222 138 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 NPYP01303 97 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 HLA-DQA1P01909 254 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 AMTP48728 403 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 GAGE6Q13070 117 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 MPV17L2Q567V2 206 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 Q6ZN92 141 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 ORMDL3Q8N138 153 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 C20orf78Q9BR46 151 aa8.13□□□□□ -1.11
CHD4-203ENST00000535717 K7ERU9 68 aa8.12□□□□□ -1.11
CHD4-203ENST00000535717 APCSP02743 223 aa8.12□□□□□ -1.11
CHD4-203ENST00000535717 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
CHD4-203ENST00000535717 PRELID3AQ96N28 172 aa8.12□□□□□ -1.11
CHD4-203ENST00000535717 CHCHD7Q9BUK0 85 aa8.12□□□□□ -1.11
CHD4-203ENST00000535717 RPL32P62910 135 aaKnown RBP8.11□□□□□ -1.11
CHD4-203ENST00000535717 BATFQ16520 125 aa8.11□□□□□ -1.11
CHD4-203ENST00000535717 OCIAD2Q56VL3 154 aa8.11□□□□□ -1.11
CHD4-203ENST00000535717 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
CHD4-203ENST00000535717 KLK12Q9UKR0 248 aa8.11□□□□□ -1.11
CHD4-203ENST00000535717 SCGB1A1P11684 91 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 LAGE3Q14657 143 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 Q9HAA7 133 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 PKD1P98161 4303 aa8.1□□□□□ -1.11
CHD4-203ENST00000535717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.11
CHD4-203ENST00000535717 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.11
CHD4-203ENST00000535717 UBE2L6O14933 153 aa8.09□□□□□ -1.11
CHD4-203ENST00000535717 FCER1GP30273 86 aa8.09□□□□□ -1.11
CHD4-203ENST00000535717 KIAA1644Q3SXP7 199 aa8.09□□□□□ -1.11
CHD4-203ENST00000535717 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
CHD4-203ENST00000535717 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
CHD4-203ENST00000535717 A0A1B0GUV1 79 aa8.08□□□□□ -1.12
CHD4-203ENST00000535717 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
CHD4-203ENST00000535717 PRSS47A8MTI9 375 aa8.08□□□□□ -1.12
CHD4-203ENST00000535717 TMEM238C9JI98 176 aa8.08□□□□□ -1.12
CHD4-203ENST00000535717 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
CHD4-203ENST00000535717 C3orf79P0CE67 100 aa8.08□□□□□ -1.12
CHD4-203ENST00000535717 TNP2Q05952 138 aa8.08□□□□□ -1.12
CHD4-203ENST00000535717 IGLV4-60A0A075B6I1 120 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 TRAV8-3A0A0A6YYJ7 113 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 LOC389332A0A1B0GUA5 103 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 H7C423 109 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 FGF6P10767 208 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 KRTDAPP60985 99 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 ENHOQ6UWT2 76 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 C20orf203Q8NBC4 194 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 UBE2WQ96B02 151 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 PMCHL2Q9BQD1 86 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
CHD4-203ENST00000535717 DNAH11Q96DT5 4516 aa8.06□□□□□ -1.12
CHD4-203ENST00000535717 TAX1BP3O14907 124 aa8.06□□□□□ -1.12
CHD4-203ENST00000535717 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
CHD4-203ENST00000535717 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
CHD4-203ENST00000535717 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
CHD4-203ENST00000535717 PRR34Q9NV39 138 aa8.06□□□□□ -1.12
CHD4-203ENST00000535717 EPPK1P58107 5090 aaKnown RBP8.05□□□□□ -1.12
CHD4-203ENST00000535717 RNASEKQ6P5S7 137 aaKnown RBP8.05□□□□□ -1.12
CHD4-203ENST00000535717 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
CHD4-203ENST00000535717 Q8N8P6 123 aa8.05□□□□□ -1.12
CHD4-203ENST00000535717 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
CHD4-203ENST00000535717 CRPP02741 224 aa8.04□□□□□ -1.12
CHD4-203ENST00000535717 TM2D2Q9BX73 214 aa8.04□□□□□ -1.12
CHD4-203ENST00000535717 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
CHD4-203ENST00000535717 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
CHD4-203ENST00000535717 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
CHD4-203ENST00000535717 RPL39P62891 51 aaKnown RBP8.03□□□□□ -1.12
CHD4-203ENST00000535717 REG3AQ06141 175 aa8.03□□□□□ -1.12
CHD4-203ENST00000535717 VAMP3Q15836 100 aa8.03□□□□□ -1.12
CHD4-203ENST00000535717 MIAQ16674 131 aa8.03□□□□□ -1.12
CHD4-203ENST00000535717 RMI2Q96E14 147 aa8.03□□□□□ -1.12
CHD4-203ENST00000535717 PKHD1P08F94 4074 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms