RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 Q6ZUT4 128 aa14.65□□□□□ -0.06
PDXDC1-205ENST00000535621 MRPL52Q86TS9 123 aaKnown RBP14.65□□□□□ -0.06
PDXDC1-205ENST00000535621 TMEM243Q9BU79 118 aa14.65□□□□□ -0.06
PDXDC1-205ENST00000535621 C11orf68Q9H3H3 251 aaKnown RBP14.65□□□□□ -0.06
PDXDC1-205ENST00000535621 COL7A1Q02388 2944 aa14.64□□□□□ -0.07
PDXDC1-205ENST00000535621 TRBV6-8A0A0A6YYG3 113 aa14.64□□□□□ -0.07
PDXDC1-205ENST00000535621 MRPS36P82909 103 aaKnown RBP14.64□□□□□ -0.07
PDXDC1-205ENST00000535621 NFE4Q86UQ8 179 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 PCP2Q8IVA1 136 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 ATP6V0E2Q8NHE4 81 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 CSDC2Q9Y534 153 aaKnown RBP14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 A0A0J9YY99 117 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 C12orf74Q32Q52 190 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 BOD1L2Q8IYS8 172 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 TM2D3Q9BRN9 247 aa14.63□□□□□ -0.07
PDXDC1-205ENST00000535621 F5H768 121 aa14.62□□□□□ -0.07
PDXDC1-205ENST00000535621 DGAT2L7PQ6IED9 249 aa14.62□□□□□ -0.07
PDXDC1-205ENST00000535621 MRPS16Q9Y3D3 137 aaKnown RBP14.62□□□□□ -0.07
PDXDC1-205ENST00000535621 TRAV26-1A0A087WT03 109 aa14.61□□□□□ -0.07
PDXDC1-205ENST00000535621 TMEM97Q5BJF2 176 aa14.61□□□□□ -0.07
PDXDC1-205ENST00000535621 A0A0J9YWU9 116 aa14.61□□□□□ -0.07
PDXDC1-205ENST00000535621 H7C423 109 aa14.61□□□□□ -0.07
PDXDC1-205ENST00000535621 CHAC1Q9BUX1 264 aa14.61□□□□□ -0.07
PDXDC1-205ENST00000535621 PRKDCP78527 4128 aaKnown RBP14.6□□□□□ -0.07
PDXDC1-205ENST00000535621 MEGF8Q7Z7M0 2845 aa14.6□□□□□ -0.07
PDXDC1-205ENST00000535621 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
PDXDC1-205ENST00000535621 UBE2L6O14933 153 aa14.6□□□□□ -0.07
PDXDC1-205ENST00000535621 HTN3P15516 51 aa14.6□□□□□ -0.07
PDXDC1-205ENST00000535621 DLEU1O43261 78 aa14.59□□□□□ -0.07
PDXDC1-205ENST00000535621 SPATA25Q9BR10 227 aa14.59□□□□□ -0.07
PDXDC1-205ENST00000535621 SMAGPQ0VAQ4 97 aa14.59□□□□□ -0.07
PDXDC1-205ENST00000535621 TTTY13Q9BZ97 58 aa14.59□□□□□ -0.07
PDXDC1-205ENST00000535621 TMEM170BQ5T4T1 132 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 C2orf88Q9BSF0 95 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 SNHG12Q9BXW3 62 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 A0A096LPF7 62 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 E9PLD3 99 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 C2orf91Q6ZV80 131 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 CDC42SE2Q9NRR3 84 aa14.58□□□□□ -0.08
PDXDC1-205ENST00000535621 AMMECR1LQ6DCA0 310 aa14.57□□□□□ -0.08
PDXDC1-205ENST00000535621 M0R143 59 aa14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 EREGO14944 169 aa14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 OR5A1Q8NGJ0 315 aa14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 ZNF22P17026 224 aaPredicted RBP14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 UBE2D1P51668 147 aa14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 GAGE6Q13070 117 aa14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 CHCHD5Q9BSY4 110 aa14.56□□□□□ -0.08
PDXDC1-205ENST00000535621 TRAV8-6A0A0B4J262 113 aa14.55□□□□□ -0.08
PDXDC1-205ENST00000535621 ZNF25P17030 456 aaPredicted RBP14.55□□□□□ -0.08
PDXDC1-205ENST00000535621 TINCRA0A1B0GVN0 87 aa14.54□□□□□ -0.08
PDXDC1-205ENST00000535621 Q6ZTC4 211 aa14.54□□□□□ -0.08
PDXDC1-205ENST00000535621 TMEM101Q96IK0 257 aa14.54□□□□□ -0.08
PDXDC1-205ENST00000535621 HERVK_113P61574 105 aa14.54□□□□□ -0.08
PDXDC1-205ENST00000535621 MRPL23Q16540 153 aaKnown RBP14.53□□□□□ -0.08
PDXDC1-205ENST00000535621 MAPKAPK5-AS1Q8N8E1 139 aa14.53□□□□□ -0.08
PDXDC1-205ENST00000535621 TMEM223A0PJW6 202 aa14.53□□□□□ -0.08
PDXDC1-205ENST00000535621 SIVA1O15304 175 aa14.53□□□□□ -0.08
PDXDC1-205ENST00000535621 NANOS2P60321 138 aaKnown RBP14.52□□□□□ -0.09
PDXDC1-205ENST00000535621 ICOSQ9Y6W8 199 aa14.51□□□□□ -0.09
PDXDC1-205ENST00000535621 B9D2Q9BPU9 175 aa14.51□□□□□ -0.09
PDXDC1-205ENST00000535621 STAB2Q8WWQ8 2551 aa14.51□□□□□ -0.09
PDXDC1-205ENST00000535621 IGLV4-60A0A075B6I1 120 aa14.5□□□□□ -0.09
PDXDC1-205ENST00000535621 C11orf45Q8TAV5 145 aa14.5□□□□□ -0.09
PDXDC1-205ENST00000535621 SH2D6Q7Z4S9 175 aa14.49□□□□□ -0.09
PDXDC1-205ENST00000535621 FAM19A3Q7Z5A8 133 aa14.49□□□□□ -0.09
PDXDC1-205ENST00000535621 LINC00242Q5T6M2 205 aa14.49□□□□□ -0.09
PDXDC1-205ENST00000535621 TRAV13-1A0A0B4J241 112 aa14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 H3BNG1 76 aa14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 HINT1P49773 126 aaPredicted RBP14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 TIRAPP58753 221 aa14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 BATFQ16520 125 aa14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 LBHQ53QV2 105 aaPredicted RBP14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 MPV17L2Q567V2 206 aa14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 GEMIN7Q9H840 131 aaKnown RBP14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 MYMXA0A1B0GTQ4 84 aa14.48□□□□□ -0.09
PDXDC1-205ENST00000535621 IGLV5-45A0A087WSX0 123 aa14.47□□□□□ -0.09
PDXDC1-205ENST00000535621 TSPEAR-AS2P59090 65 aa14.47□□□□□ -0.09
PDXDC1-205ENST00000535621 LINC00469Q8N7U9 141 aa14.47□□□□□ -0.09
PDXDC1-205ENST00000535621 A0A1B0GUV1 79 aa14.46□□□□□ -0.09
PDXDC1-205ENST00000535621 COX6A2Q02221 97 aa14.46□□□□□ -0.09
PDXDC1-205ENST00000535621 HIGD1BQ9P298 99 aa14.46□□□□□ -0.09
PDXDC1-205ENST00000535621 TMEM262E9PQX1 116 aa14.46□□□□□ -0.1
PDXDC1-205ENST00000535621 HERVK_113P63121 156 aa14.46□□□□□ -0.1
PDXDC1-205ENST00000535621 CDKN2A-AS1Q9UH64 79 aa14.46□□□□□ -0.1
PDXDC1-205ENST00000535621 LEPROTO15243 131 aa14.45□□□□□ -0.1
PDXDC1-205ENST00000535621 RBX1P62877 108 aa14.45□□□□□ -0.1
PDXDC1-205ENST00000535621 SEC11AP67812 179 aa14.45□□□□□ -0.1
PDXDC1-205ENST00000535621 IGHV3-64A0A075B6Q5 118 aa14.44□□□□□ -0.1
PDXDC1-205ENST00000535621 J3QQQ9 107 aa14.44□□□□□ -0.1
PDXDC1-205ENST00000535621 ZNF815PA8K554 130 aa14.44□□□□□ -0.1
PDXDC1-205ENST00000535621 DEFB131BA0A096LNP1 70 aa14.43□□□□□ -0.1
PDXDC1-205ENST00000535621 BVES-AS1Q5T3Y7 98 aa14.43□□□□□ -0.1
PDXDC1-205ENST00000535621 TRAV8-3A0A0A6YYJ7 113 aa14.42□□□□□ -0.1
PDXDC1-205ENST00000535621 LELP1Q5T871 98 aa14.42□□□□□ -0.1
PDXDC1-205ENST00000535621 IGHV1-58A0A0C4DH39 117 aa14.42□□□□□ -0.1
PDXDC1-205ENST00000535621 IGHV3-30-3P0DP02 117 aa14.42□□□□□ -0.1
PDXDC1-205ENST00000535621 H3BRM9 83 aa14.41□□□□□ -0.1
PDXDC1-205ENST00000535621 SPINK8P0C7L1 97 aa14.41□□□□□ -0.1
PDXDC1-205ENST00000535621 LGALS3P17931 250 aaKnown RBP14.41□□□□□ -0.1
PDXDC1-205ENST00000535621 LYPD5Q6UWN5 251 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms