RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 Q6ZN92 141 aa8.52□□□□□ -1.05
CHRDL2-209ENST00000534276 DNAH2Q9P225 4427 aa8.52□□□□□ -1.05
CHRDL2-209ENST00000534276 H7C423 109 aa8.51□□□□□ -1.05
CHRDL2-209ENST00000534276 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
CHRDL2-209ENST00000534276 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
CHRDL2-209ENST00000534276 GAGE12JA6NER3 117 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 H3BNG1 76 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 PAX4O43316 350 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 GAGE1Q13065 139 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 GAGE4Q13068 117 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 GAGE5Q13069 117 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 GAGE13Q4V321 117 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 CHCHD7Q9BUK0 85 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 VAMP8Q9BV40 100 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 SPANXA1Q9NS26 97 aa8.5□□□□□ -1.05
CHRDL2-209ENST00000534276 TRAV9-2A0A087WT02 112 aa8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 TRAV26-1A0A087WT03 109 aa8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 A0A087WX48 190 aa8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 ODF1Q14990 250 aa8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
CHRDL2-209ENST00000534276 BAALCQ8WXS3 180 aa8.48□□□□□ -1.05
CHRDL2-209ENST00000534276 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
CHRDL2-209ENST00000534276 F8VRH5 84 aa8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 GYPEP15421 78 aa8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 PKIAP61925 76 aa8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 RPL39P62891 51 aaKnown RBP8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 PMVKQ15126 192 aa8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 MRPL52Q86TS9 123 aaKnown RBP8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
CHRDL2-209ENST00000534276 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 HSBP1L1C9JCN9 74 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 TSTD3H0UI37 97 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 H0Y8G0 127 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 DPM2O94777 84 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 PLNP26678 52 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 ZNF664Q8N3J9 261 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 VSIG2Q96IQ7 327 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 UBE2D4Q9Y2X8 147 aa8.46□□□□□ -1.05
CHRDL2-209ENST00000534276 PKHD1P08F94 4074 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 CCL18P55774 89 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 CST9LQ9H4G1 147 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 LINC00588Q9Y4M8 146 aa8.46□□□□□ -1.06
CHRDL2-209ENST00000534276 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 IGKCP01834 107 aa8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 AMELXQ99217 191 aa8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 VCX2Q9H322 139 aa8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
CHRDL2-209ENST00000534276 TIRAPP58753 221 aa8.44□□□□□ -1.06
CHRDL2-209ENST00000534276 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
CHRDL2-209ENST00000534276 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
CHRDL2-209ENST00000534276 PAM16Q9Y3D7 125 aa8.44□□□□□ -1.06
CHRDL2-209ENST00000534276 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
CHRDL2-209ENST00000534276 TNP2Q05952 138 aa8.43□□□□□ -1.06
CHRDL2-209ENST00000534276 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
CHRDL2-209ENST00000534276 C6orf223Q8N319 242 aa8.43□□□□□ -1.06
CHRDL2-209ENST00000534276 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
CHRDL2-209ENST00000534276 PKD1P98161 4303 aa8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 UBE2L6O14933 153 aa8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 FGF6P10767 208 aa8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 ATOH7Q8N100 152 aa8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 PMCHL2Q9BQD1 86 aa8.42□□□□□ -1.06
CHRDL2-209ENST00000534276 A0A0J9YY99 117 aa8.41□□□□□ -1.06
CHRDL2-209ENST00000534276 FAM104AQ969W3 186 aa8.41□□□□□ -1.06
CHRDL2-209ENST00000534276 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
CHRDL2-209ENST00000534276 C2orf88Q9BSF0 95 aa8.41□□□□□ -1.06
CHRDL2-209ENST00000534276 Q9H8V8 135 aa8.41□□□□□ -1.06
CHRDL2-209ENST00000534276 A0A1B0GUV1 79 aa8.4□□□□□ -1.06
CHRDL2-209ENST00000534276 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.06
CHRDL2-209ENST00000534276 FAM19A3Q7Z5A8 133 aa8.4□□□□□ -1.06
CHRDL2-209ENST00000534276 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
CHRDL2-209ENST00000534276 IGLV4-69A0A075B6H9 119 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 hDV102S1A0JD36 115 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 SEC11AP67812 179 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 ESRGQ1W209 222 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 MIEN1Q9BRT3 115 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
CHRDL2-209ENST00000534276 A0A096LPF7 62 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 C16orf90A8MZG2 172 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 MAJINQ3KP22 176 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 LELP1Q5T871 98 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 CHCHD5Q9BSY4 110 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
CHRDL2-209ENST00000534276 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms