RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 PRSS1P07477 247 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 FGF6P10767 208 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 MIFP14174 115 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 FCER1GP30273 86 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 PIK3CD-AS1Q5SR53 167 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 LINC00173Q6ZV60 143 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 Q8NAQ8 132 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 RASL10AQ92737 203 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 NAA38Q9BRA0 125 aaKnown RBP4.37□□□□□ -1.71
CMTM1-220ENST00000534143 TM2D3Q9BRN9 247 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 TM2D2Q9BX73 214 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 NXT2Q9NPJ8 142 aaKnown RBP4.37□□□□□ -1.71
CMTM1-220ENST00000534143 PHLDA3Q9Y5J5 127 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 KIF25-AS1Q9Y6Z4 181 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 RYR3Q15413 4870 aa4.37□□□□□ -1.71
CMTM1-220ENST00000534143 TRBV20-1A0A075B6N2 111 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 M0R381 172 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 PLNP26678 52 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 CKS2P33552 79 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 ETDBQ3ZM63 59 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 SPANXN1Q5VSR9 72 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 MRAPQ8TCY5 172 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 URB1-AS1Q96HZ7 61 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 JPT2Q9H910 190 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 RETNQ9HD89 108 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 NOP10Q9NPE3 64 aaKnown RBP4.36□□□□□ -1.71
CMTM1-220ENST00000534143 COL7A1Q02388 2944 aa4.36□□□□□ -1.71
CMTM1-220ENST00000534143 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
CMTM1-220ENST00000534143 LOC389332A0A1B0GUA5 103 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE12JA6NER3 117 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 A8MWV9 139 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 RS1O15537 224 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE7O76087 117 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 CRYGDP07320 174 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE12FP0CL80 117 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE12GP0CL81 117 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE12IP0CL82 117 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 EVI2AP22794 236 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 LINC00315P59091 139 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE2BQ13066 116 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE4Q13068 117 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 WFDC2Q14508 124 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 C12orf74Q32Q52 190 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 ZNF876PQ49A33 203 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE2EQ4V326 116 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 FAM104BQ5XKR9 115 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 Q6ZTI0 123 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 POM121L12Q8N7R1 296 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 B9D2Q9BPU9 175 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 TMEM126AQ9H061 195 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 GAGE2DQ9UEU5 116 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 SS18L2Q9UHA2 77 aa4.35□□□□□ -1.71
CMTM1-220ENST00000534143 TRGV1A0A0A0MS02 117 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 LYRM9A8MSI8 78 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 DEFB4AO15263 64 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 IFI27P40305 119 aaPredicted RBP4.34□□□□□ -1.71
CMTM1-220ENST00000534143 HERVK_113P61574 105 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 Q6ZUT4 128 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 AMN1Q8IY45 258 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 C14orf178Q8N769 122 aaPredicted RBP4.34□□□□□ -1.71
CMTM1-220ENST00000534143 C18orf15Q96N68 181 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 DPH3P1Q9H4G8 78 aa4.34□□□□□ -1.71
CMTM1-220ENST00000534143 TRBV25-1A0A075B6N4 114 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 TRAV4A0A0B4J268 109 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 D6R8Y8 96 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 SCGB1C2P0DMR2 95 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 IFITM1P13164 125 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 PSMB2P49721 201 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 FXYD2P54710 66 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 EMP1P54849 157 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
CMTM1-220ENST00000534143 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 CFAP126Q5VTH2 177 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 SH2D6Q7Z4S9 175 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 C11orf68Q9H3H3 251 aaKnown RBP4.33□□□□□ -1.72
CMTM1-220ENST00000534143 TP73-AS1Q9UF72 201 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 U3KQK5 164 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
CMTM1-220ENST00000534143 A0A087WWL8 130 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 LOC107984156A0A0G2JMH3 177 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 LINC01549A6NIU2 74 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 NCR2O95944 276 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 NHLRC4P0CG21 123 aaPredicted RBP4.32□□□□□ -1.72
CMTM1-220ENST00000534143 SPART-AS1P0CW21 52 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 SRSF9Q13242 221 aaKnown RBP eCLIP4.32□□□□□ -1.72
CMTM1-220ENST00000534143 MRPL23Q16540 153 aaKnown RBP4.32□□□□□ -1.72
CMTM1-220ENST00000534143 PAPPA-AS1Q5QFB9 102 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 Q6Q795 121 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 PCP2Q8IVA1 136 aa4.32□□□□□ -1.72
CMTM1-220ENST00000534143 ARL17AQ8IVW1 177 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms