RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 HERVK_113P63121 156 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 DAZ2Q13117 558 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 MORN3Q6PF18 240 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 AMTNQ6UX39 209 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 DAZ4Q86SG3 579 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 DAZ3Q9NR90 486 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 PRO0461Q9UI25 63 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 LINC00527Q9UJ94 153 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 TSSC4Q9Y5U2 329 aaPredicted RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 ITPR3Q14573 2671 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 TEX15Q9BXT5 2789 aa4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 ANK3Q12955 4377 aaKnown RBP4.23□□□□□ -1.73
CLNS1A-212ENST00000533957 CCDC168Q8NDH2 2452 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 LOC107984156A0A0G2JMH3 177 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 TGFAP01135 160 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 ACYP1P07311 99 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 ZNF22P17026 224 aaPredicted RBP4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 MT3P25713 68 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 HERV-K104P63124 156 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 DEFB112Q30KQ8 113 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 ETDBQ3ZM63 59 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 ARL17AQ8IVW1 177 aa4.22□□□□□ -1.73
CLNS1A-212ENST00000533957 WNK2Q9Y3S1 2297 aa4.21□□□□□ -1.73
CLNS1A-212ENST00000533957 F8P00451 2351 aa4.21□□□□□ -1.73
CLNS1A-212ENST00000533957 FLNAP21333 2647 aaKnown RBP4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 TACC2O95359 2948 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 IGLV4-3A0A075B6K6 122 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 IGHV3OR16-10A0A075B7F0 116 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 IGLV5-45A0A087WSX0 123 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 F6UB75 175 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 H3BT86 120 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 J3KRW8 73 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 RS1O15537 224 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 SAP30O75446 220 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 TSPAN13O95857 204 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 INSP01308 110 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 ZNF688P0C7X2 276 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 SRD5A1P18405 259 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 SYNJ2BPP57105 145 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 WFDC2Q14508 124 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 FAM74A4Q5TZK3 123 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 DGAT2L7PQ6IED9 249 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 WFDC11Q8NEX6 87 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 ZNRF2Q8NHG8 242 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 OVOL2Q9BRP0 275 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 GTSF1LQ9H1H1 148 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 GEMIN7Q9H840 131 aaKnown RBP4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 ARHGAP32A7KAX9 2087 aa4.21□□□□□ -1.74
CLNS1A-212ENST00000533957 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.21□□□□□ -1.743e-6■■□□□ 13.4
CLNS1A-212ENST00000533957 A0A096LNT2 108 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 TRBV10-2A0A0K0K1G8 114 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 IGHV4-59P01825 116 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 CD28P10747 220 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 AZU1P20160 251 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 PSMB2P49721 201 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 RPL36AP83881 106 aaKnown RBP4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 SPINK13Q1W4C9 94 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 ZFAND6Q6FIF0 208 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 Q6Q795 121 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 DYNLRB2Q8TF09 96 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 VSIG2Q96IQ7 327 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 DUX3Q96PT4 197 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 TTTY13Q9BZ97 58 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 ZNF702PQ9H963 129 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 CELSR1Q9NYQ6 3014 aa4.2□□□□□ -1.74
CLNS1A-212ENST00000533957 CREBBPQ92793 2442 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 IGKV3-7A0A075B6H7 116 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 A4D1N5 150 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 SLC25A20O43772 301 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 FHL3Q13643 280 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 DEFB114Q30KQ6 69 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 STHQ8IWL8 128 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 ANKRD29Q8N6D5 301 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 KLHL30-AS1Q8NEE0 82 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 TMEM263Q8WUH6 116 aaKnown RBP4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 LINC01587Q99440 93 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 NDUFA12Q9UI09 145 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 UBE2D4Q9Y2X8 147 aa4.19□□□□□ -1.74
CLNS1A-212ENST00000533957 K7ERJ3 54 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 NDUFA1O15239 70 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 IGHV4-31P0DP07 118 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 DEFB131AP59861 70 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 MIAQ16674 131 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 Q6ZQT7 251 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 MUC7Q8TAX7 377 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 ZNF418Q8TF45 676 aaPredicted RBP4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
CLNS1A-212ENST00000533957 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms