RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 SPACA4Q8TDM5 124 aa5.84□□□□□ -1.47
PACS1-214ENST00000533811 SSBP4Q9BWG4 385 aaPredicted RBP5.84□□□□□ -1.47
PACS1-214ENST00000533811 TRAPPC1Q9Y5R8 145 aa5.84□□□□□ -1.47
PACS1-214ENST00000533811 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 SNAI2O43623 268 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 IGLC6P0CF74 106 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 GZMBP10144 247 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 CACNG7P62955 275 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 SPANXN1Q5VSR9 72 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 KRTAP26-1Q6PEX3 210 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 ZFP82Q8N141 532 aa5.83□□□□□ -1.48
PACS1-214ENST00000533811 TMA7Q9Y2S6 64 aaKnown RBP5.83□□□□□ -1.48
PACS1-214ENST00000533811 IGKV2-24A0A0C4DH68 120 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 TRGC2P03986 189 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 PRR3P79522 188 aaKnown RBP5.82□□□□□ -1.48
PACS1-214ENST00000533811 MAJINQ3KP22 176 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 REG3GQ6UW15 175 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 LYZL1Q6UWQ5 148 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 TMEM136Q6ZRR5 245 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 SMIM15Q7Z3B0 74 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 TPPP3Q9BW30 176 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 PRR34Q9NV39 138 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 PLAC8Q9NZF1 115 aa5.82□□□□□ -1.48
PACS1-214ENST00000533811 F5H697 171 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 SLPIP03973 132 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 NTF3P20783 257 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 RAB4BP61018 213 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 SSTP61278 116 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 REG3AQ06141 175 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 COA6Q5JTJ3 125 aaKnown RBP5.81□□□□□ -1.48
PACS1-214ENST00000533811 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
PACS1-214ENST00000533811 MRPL54Q6P161 138 aaKnown RBP5.81□□□□□ -1.48
PACS1-214ENST00000533811 PGLYRP4Q96LB8 373 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 MRPL18Q9H0U6 180 aaKnown RBP5.81□□□□□ -1.48
PACS1-214ENST00000533811 LPAP08519 4548 aa5.81□□□□□ -1.48
PACS1-214ENST00000533811 TRBV25-1A0A075B6N4 114 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 MUC21A0A0G2JKD1 596 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 MUC21A0A140T8X8 626 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BKO60814 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 APCSP02743 223 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 PPBPP02775 128 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BJP06899 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 TRGC1P0CF51 173 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BOP23527 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BBP33778 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BDP58876 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BCP62807 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 COX6A2Q02221 97 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 FABP9Q0Z7S8 132 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 TWIST1Q15672 202 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST2H2BEQ16778 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.8□□□□□ -1.48
PACS1-214ENST00000533811 NTM-AS1Q6ZSK4 140 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 STPG4Q8N801 248 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 OR10AG1Q8NH19 301 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BHQ93079 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BNQ99877 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 HIST1H2BMQ99879 126 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 TMEM191AQ9H0A3 160 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 LAMTOR2Q9Y2Q5 125 aa5.8□□□□□ -1.48
PACS1-214ENST00000533811 TMEM97Q5BJF2 176 aa5.79□□□□□ -1.48
PACS1-214ENST00000533811 IGHV1-24A0A0C4DH33 117 aa5.78□□□□□ -1.48
PACS1-214ENST00000533811 CAMPP49913 170 aa5.78□□□□□ -1.48
PACS1-214ENST00000533811 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
PACS1-214ENST00000533811 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
PACS1-214ENST00000533811 PRSS3P2Q8NHM4 247 aa5.78□□□□□ -1.48
PACS1-214ENST00000533811 AP1S3Q96PC3 154 aa5.78□□□□□ -1.48
PACS1-214ENST00000533811 TRAV8-4A0A0B4J246 113 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 IGKV3OR2-268A0A0C4DH90 116 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 PPP1R17O96001 155 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 FAM104BQ5XKR9 115 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 PACRGQ96M98 296 aaPredicted RBP5.77□□□□□ -1.49
PACS1-214ENST00000533811 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
PACS1-214ENST00000533811 IGLV4-60A0A075B6I1 120 aa5.76□□□□□ -1.49
PACS1-214ENST00000533811 ESDP10768 282 aa5.76□□□□□ -1.49
PACS1-214ENST00000533811 IQCJQ1A5X6 159 aa5.76□□□□□ -1.49
PACS1-214ENST00000533811 ORMDL3Q8N138 153 aa5.76□□□□□ -1.49
PACS1-214ENST00000533811 C15orf56Q8N910 161 aa5.76□□□□□ -1.49
PACS1-214ENST00000533811 MRAP2Q96G30 205 aa5.76□□□□□ -1.49
PACS1-214ENST00000533811 A0A096LNI7 61 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 H7C1H1 209 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 UBE2L6O14933 153 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 MGPP08493 103 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 PMCHP20382 165 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 S100A2P29034 98 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 NDUFA6P56556 154 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 ALKBH7Q9BT30 221 aaPredicted RBP5.75□□□□□ -1.49
PACS1-214ENST00000533811 TMEM243Q9BU79 118 aa5.75□□□□□ -1.49
PACS1-214ENST00000533811 RAB4AP20338 218 aa5.74□□□□□ -1.49
PACS1-214ENST00000533811 SNRPEP62304 92 aaKnown RBP5.74□□□□□ -1.49
PACS1-214ENST00000533811 Q6ZRP5 223 aa5.74□□□□□ -1.49
PACS1-214ENST00000533811 BAGE3Q86Y29 109 aa5.74□□□□□ -1.49
PACS1-214ENST00000533811 TMEM18Q96B42 140 aa5.74□□□□□ -1.49
PACS1-214ENST00000533811 CHCHD1Q96BP2 118 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms