RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
SVIP-205ENST00000533774 RPL39LQ96EH5 51 aaKnown RBP7.22□□□□□ -1.25
SVIP-205ENST00000533774 TCEAL7Q9BRU2 100 aa7.22□□□□□ -1.25
SVIP-205ENST00000533774 MARVELD1Q9BSK0 173 aa7.22□□□□□ -1.25
SVIP-205ENST00000533774 MAP1LC3BQ9GZQ8 125 aa7.22□□□□□ -1.25
SVIP-205ENST00000533774 H7C423 109 aa7.21□□□□□ -1.26
SVIP-205ENST00000533774 BCL2L11O43521 198 aa7.21□□□□□ -1.26
SVIP-205ENST00000533774 Q5BKY6 102 aa7.21□□□□□ -1.26
SVIP-205ENST00000533774 ISOC2Q96AB3 205 aa7.21□□□□□ -1.26
SVIP-205ENST00000533774 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
SVIP-205ENST00000533774 RETNLBQ9BQ08 111 aa7.21□□□□□ -1.26
SVIP-205ENST00000533774 RPP21Q9H633 154 aaKnown RBP7.21□□□□□ -1.26
SVIP-205ENST00000533774 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.26
SVIP-205ENST00000533774 APCSP02743 223 aa7.2□□□□□ -1.26
SVIP-205ENST00000533774 A0A087X002 238 aa7.19□□□□□ -1.26
SVIP-205ENST00000533774 NCR2O95944 276 aa7.19□□□□□ -1.26
SVIP-205ENST00000533774 S100A9P06702 114 aaKnown RBP7.19□□□□□ -1.26
SVIP-205ENST00000533774 ZNF25P17030 456 aaPredicted RBP7.19□□□□□ -1.26
SVIP-205ENST00000533774 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
SVIP-205ENST00000533774 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
SVIP-205ENST00000533774 SLC7A5P1Q8MH63 180 aa7.19□□□□□ -1.26
SVIP-205ENST00000533774 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
SVIP-205ENST00000533774 TRGC1P0CF51 173 aa7.18□□□□□ -1.26
SVIP-205ENST00000533774 SS18Q15532 418 aa7.18□□□□□ -1.26
SVIP-205ENST00000533774 AKR1C8PQ5T2L2 129 aa7.18□□□□□ -1.26
SVIP-205ENST00000533774 OR2D3Q8NGH3 330 aa7.18□□□□□ -1.26
SVIP-205ENST00000533774 C2orf48Q96LS8 159 aa7.18□□□□□ -1.26
SVIP-205ENST00000533774 CDC42SE2Q9NRR3 84 aa7.18□□□□□ -1.26
SVIP-205ENST00000533774 C19orf71A6NCJ1 209 aa7.17□□□□□ -1.26
SVIP-205ENST00000533774 ESDP10768 282 aa7.17□□□□□ -1.26
SVIP-205ENST00000533774 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
SVIP-205ENST00000533774 UPK1BO75841 260 aa7.16□□□□□ -1.26
SVIP-205ENST00000533774 FOXA3P55318 350 aaPredicted RBP7.16□□□□□ -1.26
SVIP-205ENST00000533774 TMUB2Q71RG4 321 aa7.16□□□□□ -1.26
SVIP-205ENST00000533774 TMEM101Q96IK0 257 aa7.16□□□□□ -1.26
SVIP-205ENST00000533774 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
SVIP-205ENST00000533774 A0A1B0GV50 99 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 COX7A2LO14548 114 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 TSHBP01222 138 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 MALP21145 153 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 RPL35P42766 123 aaKnown RBP7.15□□□□□ -1.26
SVIP-205ENST00000533774 TPRXLQ17RH7 258 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 C10orf25Q5T742 122 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 EIF5AL1Q6IS14 154 aaKnown RBP7.15□□□□□ -1.26
SVIP-205ENST00000533774 C5orf38Q86SI9 138 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 BTF3L4Q96K17 158 aa7.15□□□□□ -1.26
SVIP-205ENST00000533774 BORCS7-ASMTA0A0B4J1R7 106 aa7.14□□□□□ -1.27
SVIP-205ENST00000533774 F2Z2F3 143 aa7.14□□□□□ -1.27
SVIP-205ENST00000533774 RPS20P60866 119 aaKnown RBP7.14□□□□□ -1.27
SVIP-205ENST00000533774 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
SVIP-205ENST00000533774 G3V3Q6 166 aa7.13□□□□□ -1.27
SVIP-205ENST00000533774 M0QXV9 152 aa7.13□□□□□ -1.27
SVIP-205ENST00000533774 ZNF861PO60384 105 aa7.13□□□□□ -1.27
SVIP-205ENST00000533774 S100A6P06703 90 aa7.13□□□□□ -1.27
SVIP-205ENST00000533774 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
SVIP-205ENST00000533774 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
SVIP-205ENST00000533774 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
SVIP-205ENST00000533774 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
SVIP-205ENST00000533774 TMEM242Q9NWH2 141 aa7.13□□□□□ -1.27
SVIP-205ENST00000533774 I3L3M4 83 aa7.12□□□□□ -1.27
SVIP-205ENST00000533774 PMCHP20382 165 aa7.12□□□□□ -1.27
SVIP-205ENST00000533774 CTRLP40313 264 aa7.12□□□□□ -1.27
SVIP-205ENST00000533774 UBE2BP63146 152 aa7.12□□□□□ -1.27
SVIP-205ENST00000533774 C9orf62Q8N4C0 152 aa7.12□□□□□ -1.27
SVIP-205ENST00000533774 RNASE7Q9H1E1 156 aaKnown RBP7.12□□□□□ -1.27
SVIP-205ENST00000533774 CYTL1Q9NRR1 136 aa7.12□□□□□ -1.27
SVIP-205ENST00000533774 MRPL35Q9NZE8 188 aaKnown RBP7.12□□□□□ -1.27
SVIP-205ENST00000533774 C1orf196B1AJZ1 125 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 IFNA1P01562 189 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 TLX1NBP0CAT3 122 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 TWIST1Q15672 202 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 GAGE2EQ4V326 116 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 CENPWQ5EE01 88 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 TYMSOSQ8TAI1 123 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 MBD3L1Q8WWY6 194 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 CNFNQ9BYD5 112 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 GAGE2DQ9UEU5 116 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 ALG5Q9Y673 324 aa7.11□□□□□ -1.27
SVIP-205ENST00000533774 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
SVIP-205ENST00000533774 PFDN1O60925 122 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 UNQ6190/PRO20217Q6UXQ8 127 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 SFT2D1Q8WV19 159 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
SVIP-205ENST00000533774 TRAV13-1A0A0B4J241 112 aa7.09□□□□□ -1.27
SVIP-205ENST00000533774 TRBV6-5A0A0K0K1A5 114 aa7.09□□□□□ -1.27
SVIP-205ENST00000533774 S100ZQ8WXG8 99 aa7.09□□□□□ -1.27
SVIP-205ENST00000533774 C11orf52Q96A22 123 aa7.09□□□□□ -1.27
SVIP-205ENST00000533774 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
SVIP-205ENST00000533774 SMDT1Q9H4I9 107 aa7.09□□□□□ -1.27
SVIP-205ENST00000533774 FXYD6-FXYD2A0A087WZ82 144 aa7.08□□□□□ -1.28
SVIP-205ENST00000533774 B5MCH6 92 aa7.08□□□□□ -1.28
SVIP-205ENST00000533774 C9orf129Q5T035 196 aaKnown RBP7.08□□□□□ -1.28
SVIP-205ENST00000533774 KCNRGQ8N5I3 272 aa7.08□□□□□ -1.28
SVIP-205ENST00000533774 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
SVIP-205ENST00000533774 XKRY2A2RUG3 117 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms