RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 CDPF1Q6NVV7 123 aa4.74□□□□□ -1.65
UBQLN1-206ENST00000533705 A0A0J9YWU9 116 aa4.74□□□□□ -1.65
UBQLN1-206ENST00000533705 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
UBQLN1-206ENST00000533705 TRBV10-2A0A0K0K1G8 114 aa4.74□□□□□ -1.65
UBQLN1-206ENST00000533705 WFDC9Q8NEX5 89 aa4.74□□□□□ -1.65
UBQLN1-206ENST00000533705 IGKV2D-26A0A0A0MRZ7 120 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 H3BT86 120 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 M0QY20 66 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 IGHV4-30-4P0DP06 118 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 UBE2D1P51668 147 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 PROK1P58294 105 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 IGLV1-40P01703 118 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 C9orf85Q96MD7 179 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 OBSL1O75147 1896 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 NDUFA7O95182 113 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 ZNF295-AS1Q8N0V1 137 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 ZNF462Q96JM2 2506 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 IGLV4-3A0A075B6K6 122 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 RBX1P62877 108 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 MBD6Q96DN6 1003 aa4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 GOLGB1Q14789 3259 aaKnown RBP4.73□□□□□ -1.65
UBQLN1-206ENST00000533705 IBA57-AS1B1ANH7 110 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 CLUHP3Q96NS8 147 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 ALPK3Q96L96 1907 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 IGKV4-1P06312 121 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 SPATA12Q7Z6I5 190 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 ZNF22P17026 224 aaPredicted RBP4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 LELP1Q5T871 98 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 ARHGAP21Q5T5U3 1957 aa4.72□□□□□ -1.65
UBQLN1-206ENST00000533705 ATOX1O00244 68 aa4.71□□□□□ -1.65
UBQLN1-206ENST00000533705 LINC00526Q96FQ7 95 aa4.71□□□□□ -1.65
UBQLN1-206ENST00000533705 ZNF106Q9H2Y7 1883 aaKnown RBP4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 PRM2P04554 102 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 WFDC2Q14508 124 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 LOC100131303A0A0U1RQF7 123 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 BPY2O14599 106 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 CRIP1P50238 77 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 LRRK2Q5S007 2527 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 ABCA12Q86UK0 2595 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 PPDPFQ9H3Y8 114 aa4.71□□□□□ -1.66
UBQLN1-206ENST00000533705 CD164L2Q6UWJ8 174 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 RETNQ9HD89 108 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 UBE2D4Q9Y2X8 147 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 PLXNB1O43157 2135 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 IGKV2-28A0A075B6P5 120 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 TMEM223A0PJW6 202 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 IGKV2D-28P01615 120 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 TNRC6BQ9UPQ9 1833 aaKnown RBP4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 FOXI1Q12951 378 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 FAM236AA0A1B0GUQ0 79 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 FAM236BA0A1B0GV22 79 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 NUPR2A6NF83 97 aa4.7□□□□□ -1.66
UBQLN1-206ENST00000533705 TRBV6-5A0A0K0K1A5 114 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 KLLNB2CW77 178 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 MRGPRG-AS1Q2M3A8 158 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 DCANP1Q8TF63 244 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 IGLV4-69A0A075B6H9 119 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 RNASE3P12724 160 aaKnown RBP4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 PIK3CD-AS1Q5SR53 167 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 PYGO1Q9Y3Y4 419 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 HTTP42858 3142 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 TAX1BP3O14907 124 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 SPINK6Q6UWN8 80 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 TLN2Q9Y4G6 2542 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 PCNX3Q9H6A9 2034 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 BRI3O95415 125 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 SEC61GP60059 68 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 CASC2Q6XLA1 102 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 UPK3BQ9BT76 320 aa4.69□□□□□ -1.66
UBQLN1-206ENST00000533705 RNF185Q96GF1 192 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 PRR9Q5T870 116 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 ARHGAP32A7KAX9 2087 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 IGLV2-11P01706 119 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 C6orf99Q4VX62 202 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 KIAA1549LQ6ZVL6 1849 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 LINC00959A0A1B0GUT2 108 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 UBE2D3P61077 147 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 HRCT1Q6UXD1 115 aa4.68□□□□□ -1.66
UBQLN1-206ENST00000533705 USP9XQ93008 2570 aaPredicted RBP4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 TRAV23DV6A0A075B6W5 121 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 TCL1BO95988 128 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 TSHBP01222 138 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 ODF3L2Q3SX64 289 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 CEP192Q8TEP8 1941 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 A0A1W2PPR1 153 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 PTH2Q96A98 100 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 TANC2Q9HCD6 1990 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 CEP350Q5VT06 3117 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 B5MCH6 92 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 SLPIP03973 132 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 C11orf21Q9P2W6 132 aa4.67□□□□□ -1.66
UBQLN1-206ENST00000533705 FN1P02751 2386 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms