RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 KLK12Q9UKR0 248 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 CSDC2Q9Y534 153 aaKnown RBP8.04□□□□□ -1.12
COMMD9-208ENST00000533643 HYDINQ4G0P3 5121 aa8.04□□□□□ -1.12
COMMD9-208ENST00000533643 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
COMMD9-208ENST00000533643 TTC32Q5I0X7 151 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
COMMD9-208ENST00000533643 DGAT2L7PQ6IED9 249 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 ZNF664Q8N3J9 261 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 C10orf126Q8N4M7 172 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
COMMD9-208ENST00000533643 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 PYGO1Q9Y3Y4 419 aa8.03□□□□□ -1.12
COMMD9-208ENST00000533643 RYR2Q92736 4967 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 HSBP1O75506 76 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 HBDP02042 147 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 NDUFA6P56556 154 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 PDZD11Q5EBL8 140 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 Q6ZUT4 128 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 FAM19A2Q8N3H0 131 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 SCGB3A1Q96QR1 104 aa8.02□□□□□ -1.13
COMMD9-208ENST00000533643 IGLV4-3A0A075B6K6 122 aa8.01□□□□□ -1.13
COMMD9-208ENST00000533643 LINC01549A6NIU2 74 aa8.01□□□□□ -1.13
COMMD9-208ENST00000533643 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
COMMD9-208ENST00000533643 ENHOQ6UWT2 76 aa8.01□□□□□ -1.13
COMMD9-208ENST00000533643 ERASQ7Z444 233 aa8.01□□□□□ -1.13
COMMD9-208ENST00000533643 UBE2WQ96B02 151 aa8.01□□□□□ -1.13
COMMD9-208ENST00000533643 PRR34Q9NV39 138 aa8.01□□□□□ -1.13
COMMD9-208ENST00000533643 REG3AQ06141 175 aa8□□□□□ -1.13
COMMD9-208ENST00000533643 RNASE13Q5GAN3 156 aaKnown RBP8□□□□□ -1.13
COMMD9-208ENST00000533643 CLPSL2Q6UWE3 100 aa8□□□□□ -1.13
COMMD9-208ENST00000533643 TMEM141Q96I45 108 aa8□□□□□ -1.13
COMMD9-208ENST00000533643 TIMM17AQ99595 171 aa8□□□□□ -1.13
COMMD9-208ENST00000533643 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
COMMD9-208ENST00000533643 NPSP0C0P6 89 aa7.99□□□□□ -1.13
COMMD9-208ENST00000533643 Q9HAA7 133 aa7.99□□□□□ -1.13
COMMD9-208ENST00000533643 DNAH17Q9UFH2 4485 aa7.99□□□□□ -1.13
COMMD9-208ENST00000533643 TRAV8-3A0A0A6YYJ7 113 aa7.98□□□□□ -1.13
COMMD9-208ENST00000533643 IGKV3OR2-268A0A0C4DH90 116 aa7.98□□□□□ -1.13
COMMD9-208ENST00000533643 CRPP02741 224 aa7.98□□□□□ -1.13
COMMD9-208ENST00000533643 ZC2HC1BQ5TFG8 222 aa7.98□□□□□ -1.13
COMMD9-208ENST00000533643 LINC00173Q6ZV60 143 aa7.98□□□□□ -1.13
COMMD9-208ENST00000533643 AMELXQ99217 191 aa7.98□□□□□ -1.13
COMMD9-208ENST00000533643 LINC00959A0A1B0GUT2 108 aa7.97□□□□□ -1.13
COMMD9-208ENST00000533643 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
COMMD9-208ENST00000533643 ATP5LO75964 103 aa7.97□□□□□ -1.13
COMMD9-208ENST00000533643 MIAQ16674 131 aa7.97□□□□□ -1.13
COMMD9-208ENST00000533643 VCX2Q9H322 139 aa7.97□□□□□ -1.13
COMMD9-208ENST00000533643 IGLV10-54A0A075B6I4 117 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 IFITM10A6NMD0 228 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 PAPPA-AS1Q5QFB9 102 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 C1orf134Q5TEV5 83 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 Q6ZN92 141 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 C6orf223Q8N319 242 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 BAALCQ8WXS3 180 aa7.96□□□□□ -1.14
COMMD9-208ENST00000533643 RYR3Q15413 4870 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 TRAV13-1A0A0B4J241 112 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 LEPROTL1O95214 131 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 FABP4P15090 132 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 KRTAP26-1Q6PEX3 210 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 TEX43Q6ZNM6 134 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 Q6ZRN7 208 aaPredicted RBP7.95□□□□□ -1.14
COMMD9-208ENST00000533643 NFE4Q86UQ8 179 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 C1orf43Q9BWL3 253 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 CST9LQ9H4G1 147 aa7.95□□□□□ -1.14
COMMD9-208ENST00000533643 FRAS1Q86XX4 4008 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 IGKV2D-24A0A075B6R9 120 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 S100A6P06703 90 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 PMVKQ15126 192 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 SS18Q15532 418 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 CHCHD10Q8WYQ3 142 aaPredicted RBP7.94□□□□□ -1.14
COMMD9-208ENST00000533643 RMI2Q96E14 147 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 HSPB8Q9UJY1 196 aa7.94□□□□□ -1.14
COMMD9-208ENST00000533643 CCL25O15444 150 aa7.93□□□□□ -1.14
COMMD9-208ENST00000533643 UBE2D1P51668 147 aa7.93□□□□□ -1.14
COMMD9-208ENST00000533643 SNRPEP62304 92 aaKnown RBP7.93□□□□□ -1.14
COMMD9-208ENST00000533643 HIST3H2BBQ8N257 126 aa7.93□□□□□ -1.14
COMMD9-208ENST00000533643 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
COMMD9-208ENST00000533643 TM2D2Q9BX73 214 aa7.93□□□□□ -1.14
COMMD9-208ENST00000533643 GAGE12HA6NDE8 117 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 C5orf52A6NGY3 159 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 RTL8CO15255 209 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 PRSS1P07477 247 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 XCL1P47992 114 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 MAPKAPK5-AS1Q8N8E1 139 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 PACRGQ96M98 296 aaPredicted RBP7.92□□□□□ -1.14
COMMD9-208ENST00000533643 TMA7Q9Y2S6 64 aaKnown RBP7.92□□□□□ -1.14
COMMD9-208ENST00000533643 COX11Q9Y6N1 276 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
COMMD9-208ENST00000533643 FOXI1Q12951 378 aa7.91□□□□□ -1.14
COMMD9-208ENST00000533643 LINC00242Q5T6M2 205 aa7.91□□□□□ -1.14
COMMD9-208ENST00000533643 FAM19A3Q7Z5A8 133 aa7.91□□□□□ -1.14
COMMD9-208ENST00000533643 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
COMMD9-208ENST00000533643 A0A0J9YXV3 536 aa7.9□□□□□ -1.14
COMMD9-208ENST00000533643 COX6A2Q02221 97 aa7.9□□□□□ -1.14
COMMD9-208ENST00000533643 CD164L2Q6UWJ8 174 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms