RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ARHGEF12Q9NZN5 1544 aa-0.4□□□□□ -2.47
ATM-220ENST00000533526 DNAH1Q9P2D7 4330 aa-0.4□□□□□ -2.47
ATM-220ENST00000533526 ERCC6L2Q5T890 1561 aa-0.4□□□□□ -2.47
ATM-220ENST00000533526 RGPD1P0DJD0 1748 aa-0.41□□□□□ -2.47
ATM-220ENST00000533526 KNDC1Q76NI1 1749 aa-0.41□□□□□ -2.47
ATM-220ENST00000533526 TARBP1Q13395 1621 aaKnown RBP-0.41□□□□□ -2.47
ATM-220ENST00000533526 TRBV10-3A0A0K0K1G6 114 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 LINC00959A0A1B0GUT2 108 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 HCG22E2RYF7 251 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 F2Z2F3 143 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 K7EQZ3 153 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 M0R3E3 92 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 NPFFO15130 113 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 PFDN1O60925 122 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 HIST1H1DP16402 221 aaKnown RBP-0.41□□□□□ -2.48
ATM-220ENST00000533526 SPRR2EP22531 72 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 CMPK1P30085 196 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 SSBP1Q04837 148 aaKnown RBP-0.41□□□□□ -2.48
ATM-220ENST00000533526 SPAG11AQ6PDA7 123 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 UBE2DNLQ8IWF7 75 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 TCTE3Q8IZS6 198 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 CENPHQ9H3R5 247 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 NDUFA4L2Q9NRX3 87 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 TMEM242Q9NWH2 141 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 SCN3BQ9NY72 215 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 GSKIPQ9P0R6 139 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 A0A0C4DFX4 3053 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 NF1P21359 2839 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 OVOS2A0A0J9YW53 1432 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 OVOS2Q6IE36 1432 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 MON2Q7Z3U7 1717 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 KIAA1551Q9HCM1 1747 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 GRIN2AQ12879 1464 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 NLRP1Q9C000 1473 aa-0.41□□□□□ -2.48
ATM-220ENST00000533526 AKAP13Q12802 2813 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 M0R135 149 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 FAM107AO95990 144 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 GCHFRP30047 84 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 RPS25P62851 125 aaKnown RBP-0.42□□□□□ -2.48
ATM-220ENST00000533526 SEC11CQ9BY50 192 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 TP53AIP1Q9HCN2 124 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 BATF3Q9NR55 127 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 COA4Q9NYJ1 87 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 CALML5Q9NZT1 146 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 ERG28Q9UKR5 140 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 SONP18583 2426 aaKnown RBP-0.42□□□□□ -2.48
ATM-220ENST00000533526 RYR3Q15413 4870 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 C4AP0C0L4 1744 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 C4BP0C0L5 1744 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 PRRC2CQ9Y520 2896 aaKnown RBP-0.42□□□□□ -2.48
ATM-220ENST00000533526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.42□□□□□ -2.48
ATM-220ENST00000533526 ADGRL2O95490 1459 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 ZNF518AQ6AHZ1 1483 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 IFT140Q96RY7 1462 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 KIAA1109Q2LD37 5005 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 GOLGA4Q13439 2230 aaKnown RBP-0.42□□□□□ -2.48
ATM-220ENST00000533526 MXRA5Q9NR99 2828 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 HTTP42858 3142 aa-0.42□□□□□ -2.48
ATM-220ENST00000533526 DMXL1Q9Y485 3027 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SPTBN4Q9H254 2564 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 CREBBPQ92793 2442 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SHPRHQ149N8 1683 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SPTBN5Q9NRC6 3674 aaKnown RBP-0.43□□□□□ -2.48
ATM-220ENST00000533526 PNMA8CA0A1B0GUJ8 204 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 RBAKDNA6NC62 111 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 TSTD3H0UI37 97 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 NDUFA2O43678 99 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SIX6O95475 246 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 CFDP00746 253 aaPredicted RBP-0.43□□□□□ -2.48
ATM-220ENST00000533526 APODP05090 189 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 IFITM1P13164 125 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 MT4P47944 62 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 ALX1Q15699 326 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SMIM21Q3B7S5 101 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SCIMPQ6UWF3 145 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SMIM15Q7Z3B0 74 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 NDUFA11Q86Y39 141 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 CTAGE3PQ8IX95 158 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 Q8IZM0 81 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 TSTD1Q8NFU3 115 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 SPRR4Q96PI1 79 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 RAPGEF6Q8TEU7 1601 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 CFTRP13569 1480 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 IQSEC2Q5JU85 1478 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 DYNC1H1Q14204 4646 aaKnown RBP-0.43□□□□□ -2.48
ATM-220ENST00000533526 LAMA3Q16787 3333 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 DNAH7Q8WXX0 4024 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 EHBP1L1Q8N3D4 1523 aa-0.43□□□□□ -2.48
ATM-220ENST00000533526 ADAMTS12P58397 1594 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 MYH4Q9Y623 1939 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 ZNF609O15014 1411 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 CPSF1Q10570 1443 aaKnown RBP-0.44□□□□□ -2.48
ATM-220ENST00000533526 PPIP5K1Q6PFW1 1433 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 DNAH8Q96JB1 4490 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 PTPN23Q9H3S7 1636 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 TRAV2A0A0B4J234 112 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 TRAV22A0A0B4J277 110 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 OOSP1A8MZH6 123 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 APOC4-APOC2K7ER74 178 aa-0.44□□□□□ -2.48
ATM-220ENST00000533526 HMGN4O00479 90 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms