RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
NXF1-216ENST00000533499 OPRPNQ99935 248 aaPredicted RBP11.72□□□□□ -0.53
NXF1-216ENST00000533499 SPANXA1Q9NS26 97 aa11.72□□□□□ -0.53
NXF1-216ENST00000533499 Q6ZUT4 128 aa11.71□□□□□ -0.53
NXF1-216ENST00000533499 URB1-AS1Q96HZ7 61 aa11.71□□□□□ -0.53
NXF1-216ENST00000533499 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.53
NXF1-216ENST00000533499 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.53
NXF1-216ENST00000533499 RYR3Q15413 4870 aa11.71□□□□□ -0.54
NXF1-216ENST00000533499 MIAQ16674 131 aa11.7□□□□□ -0.54
NXF1-216ENST00000533499 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
NXF1-216ENST00000533499 TM2D2Q9BX73 214 aa11.7□□□□□ -0.54
NXF1-216ENST00000533499 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
NXF1-216ENST00000533499 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
NXF1-216ENST00000533499 RTL8CO15255 209 aa11.69□□□□□ -0.54
NXF1-216ENST00000533499 LINC01546A6NGU7 62 aa11.68□□□□□ -0.54
NXF1-216ENST00000533499 HSBP1O75506 76 aa11.68□□□□□ -0.54
NXF1-216ENST00000533499 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
NXF1-216ENST00000533499 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
NXF1-216ENST00000533499 PRR34Q9NV39 138 aa11.68□□□□□ -0.54
NXF1-216ENST00000533499 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
NXF1-216ENST00000533499 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BKO60814 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HBDP02042 147 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BJP06899 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BOP23527 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BBP33778 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BDP58876 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BCP62807 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST2H2BEQ16778 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.67□□□□□ -0.54
NXF1-216ENST00000533499 Q6ZN92 141 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BHQ93079 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BNQ99877 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 HIST1H2BMQ99879 126 aa11.67□□□□□ -0.54
NXF1-216ENST00000533499 PRSS29PA6NIE9 313 aa11.66□□□□□ -0.54
NXF1-216ENST00000533499 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
NXF1-216ENST00000533499 SERF1AO75920 110 aa11.66□□□□□ -0.54
NXF1-216ENST00000533499 SS18Q15532 418 aa11.66□□□□□ -0.54
NXF1-216ENST00000533499 TMEM141Q96I45 108 aa11.66□□□□□ -0.54
NXF1-216ENST00000533499 PYGO1Q9Y3Y4 419 aa11.66□□□□□ -0.54
NXF1-216ENST00000533499 IGLV4-3A0A075B6K6 122 aa11.65□□□□□ -0.54
NXF1-216ENST00000533499 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
NXF1-216ENST00000533499 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
NXF1-216ENST00000533499 Q6ZRN7 208 aaPredicted RBP11.65□□□□□ -0.54
NXF1-216ENST00000533499 FAM19A2Q8N3H0 131 aa11.65□□□□□ -0.54
NXF1-216ENST00000533499 VCX2Q9H322 139 aa11.65□□□□□ -0.54
NXF1-216ENST00000533499 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
NXF1-216ENST00000533499 LINC00959A0A1B0GUT2 108 aa11.64□□□□□ -0.55
NXF1-216ENST00000533499 GAGE12HA6NDE8 117 aa11.64□□□□□ -0.55
NXF1-216ENST00000533499 XCL1P47992 114 aa11.64□□□□□ -0.55
NXF1-216ENST00000533499 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
NXF1-216ENST00000533499 TNP2Q05952 138 aa11.64□□□□□ -0.55
NXF1-216ENST00000533499 TEX43Q6ZNM6 134 aa11.64□□□□□ -0.55
NXF1-216ENST00000533499 ERASQ7Z444 233 aa11.64□□□□□ -0.55
NXF1-216ENST00000533499 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
NXF1-216ENST00000533499 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 IGIPA6NJ69 53 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 LECT2O14960 151 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 CCL25O15444 150 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 NDUFA6P56556 154 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 BAALCQ8WXS3 180 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 TIMM17AQ99595 171 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
NXF1-216ENST00000533499 A0A096LNJ9 63 aa11.62□□□□□ -0.55
NXF1-216ENST00000533499 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
NXF1-216ENST00000533499 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
NXF1-216ENST00000533499 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
NXF1-216ENST00000533499 NUPR1O60356 82 aa11.61□□□□□ -0.55
NXF1-216ENST00000533499 DNAH10Q8IVF4 4471 aa11.61□□□□□ -0.55
NXF1-216ENST00000533499 DNAH2Q9P225 4427 aa11.6□□□□□ -0.55
NXF1-216ENST00000533499 EREGO14944 169 aa11.6□□□□□ -0.55
NXF1-216ENST00000533499 LINC00310P59036 64 aa11.6□□□□□ -0.55
NXF1-216ENST00000533499 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
NXF1-216ENST00000533499 ATP5LO75964 103 aa11.58□□□□□ -0.56
NXF1-216ENST00000533499 NPSP0C0P6 89 aa11.58□□□□□ -0.56
NXF1-216ENST00000533499 FABP4P15090 132 aa11.58□□□□□ -0.56
NXF1-216ENST00000533499 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
NXF1-216ENST00000533499 A0A087WTM6 91 aa11.57□□□□□ -0.56
NXF1-216ENST00000533499 LINC00173Q6ZV60 143 aa11.57□□□□□ -0.56
NXF1-216ENST00000533499 AMELXQ99217 191 aa11.57□□□□□ -0.56
NXF1-216ENST00000533499 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 PRSS1P07477 247 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 WFDC2Q14508 124 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 PMVKQ15126 192 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 FRAS1Q86XX4 4008 aa11.56□□□□□ -0.56
NXF1-216ENST00000533499 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 H0Y8G0 127 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 MALP21145 153 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 FOXI1Q12951 378 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 DNAH17Q9UFH2 4485 aa11.55□□□□□ -0.56
NXF1-216ENST00000533499 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
NXF1-216ENST00000533499 UBE2D1P51668 147 aa11.54□□□□□ -0.56
NXF1-216ENST00000533499 CST9LQ9H4G1 147 aa11.54□□□□□ -0.56
NXF1-216ENST00000533499 A0A0J9YXV3 536 aa11.53□□□□□ -0.56
NXF1-216ENST00000533499 COX7A2LO14548 114 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms