RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 HERVK_113P63121 156 aa11.98□□□□□ -0.49
CTSB-228ENST00000533455 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
CTSB-228ENST00000533455 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
CTSB-228ENST00000533455 IGHV3OR16-12A0A075B7B8 117 aa11.97□□□□□ -0.49
CTSB-228ENST00000533455 Q8N2B8 174 aa11.97□□□□□ -0.49
CTSB-228ENST00000533455 COX6A2Q02221 97 aa11.96□□□□□ -0.49
CTSB-228ENST00000533455 GAGE5Q13069 117 aa11.96□□□□□ -0.49
CTSB-228ENST00000533455 GAGE6Q13070 117 aa11.96□□□□□ -0.49
CTSB-228ENST00000533455 BBC3Q96PG8 261 aaPredicted RBP11.96□□□□□ -0.49
CTSB-228ENST00000533455 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
CTSB-228ENST00000533455 ZNF462Q96JM2 2506 aa11.96□□□□□ -0.49
CTSB-228ENST00000533455 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.5
CTSB-228ENST00000533455 DAND5Q8N907 189 aa11.96□□□□□ -0.5
CTSB-228ENST00000533455 LINC00308Q8TCZ7 52 aa11.96□□□□□ -0.5
CTSB-228ENST00000533455 SPG11Q96JI7 2443 aa11.95□□□□□ -0.5
CTSB-228ENST00000533455 LINC00242Q5T6M2 205 aa11.95□□□□□ -0.5
CTSB-228ENST00000533455 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
CTSB-228ENST00000533455 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
CTSB-228ENST00000533455 Q9H8V8 135 aa11.94□□□□□ -0.5
CTSB-228ENST00000533455 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
CTSB-228ENST00000533455 COPS9Q8WXC6 57 aa11.94□□□□□ -0.5
CTSB-228ENST00000533455 CRYBG3Q68DQ2 2970 aa11.93□□□□□ -0.5
CTSB-228ENST00000533455 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
CTSB-228ENST00000533455 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
CTSB-228ENST00000533455 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
CTSB-228ENST00000533455 MAPK1IP1LQ8NDC0 245 aa11.93□□□□□ -0.5
CTSB-228ENST00000533455 DOPEY1Q5JWR5 2465 aa11.92□□□□□ -0.5
CTSB-228ENST00000533455 SMIM1B2RUZ4 78 aa11.92□□□□□ -0.5
CTSB-228ENST00000533455 COX7A2LO14548 114 aa11.92□□□□□ -0.5
CTSB-228ENST00000533455 PPDPFQ9H3Y8 114 aa11.92□□□□□ -0.5
CTSB-228ENST00000533455 IGHV4-31P0DP07 118 aa11.91□□□□□ -0.5
CTSB-228ENST00000533455 SHISA2Q6UWI4 295 aa11.91□□□□□ -0.5
CTSB-228ENST00000533455 CR1P17927 2039 aa11.9□□□□□ -0.5
CTSB-228ENST00000533455 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
CTSB-228ENST00000533455 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
CTSB-228ENST00000533455 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
CTSB-228ENST00000533455 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.5
CTSB-228ENST00000533455 CELSR2Q9HCU4 2923 aa11.89□□□□□ -0.51
CTSB-228ENST00000533455 RPL36AP83881 106 aaKnown RBP11.89□□□□□ -0.51
CTSB-228ENST00000533455 C1orf158Q8N1D5 194 aa11.89□□□□□ -0.51
CTSB-228ENST00000533455 RPL36ALQ969Q0 106 aaKnown RBP11.89□□□□□ -0.51
CTSB-228ENST00000533455 GAGE12JA6NER3 117 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 F5H768 121 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 K7EQD1 137 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 GAGE7O76087 117 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 GAGE12FP0CL80 117 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 GAGE12GP0CL81 117 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 GAGE12IP0CL82 117 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 GAGE4Q13068 117 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
CTSB-228ENST00000533455 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 CSMD2Q7Z408 3487 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
CTSB-228ENST00000533455 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
CTSB-228ENST00000533455 XCL2Q9UBD3 114 aa11.88□□□□□ -0.51
CTSB-228ENST00000533455 TRBV7-7A0A0K0K1E9 115 aa11.87□□□□□ -0.51
CTSB-228ENST00000533455 HERV-K104P63124 156 aa11.87□□□□□ -0.51
CTSB-228ENST00000533455 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
CTSB-228ENST00000533455 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
CTSB-228ENST00000533455 TRGV1A0A0A0MS02 117 aa11.87□□□□□ -0.51
CTSB-228ENST00000533455 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
CTSB-228ENST00000533455 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 B5MCH6 92 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 ACYP1P07311 99 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 NDUFA7O95182 113 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 TRACP01848 142 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
CTSB-228ENST00000533455 TRAV13-1A0A0B4J241 112 aa11.85□□□□□ -0.51
CTSB-228ENST00000533455 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
CTSB-228ENST00000533455 MEIG1Q5JSS6 88 aa11.85□□□□□ -0.51
CTSB-228ENST00000533455 STHQ8IWL8 128 aa11.85□□□□□ -0.51
CTSB-228ENST00000533455 SVIPQ8NHG7 77 aa11.85□□□□□ -0.51
CTSB-228ENST00000533455 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
CTSB-228ENST00000533455 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
CTSB-228ENST00000533455 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
CTSB-228ENST00000533455 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
CTSB-228ENST00000533455 Q6ZTI0 123 aa11.82□□□□□ -0.52
CTSB-228ENST00000533455 CENPEQ02224 2701 aa11.82□□□□□ -0.52
CTSB-228ENST00000533455 ANKRD17O75179 2603 aaKnown RBP11.82□□□□□ -0.52
CTSB-228ENST00000533455 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
CTSB-228ENST00000533455 PF4P02776 101 aa11.8□□□□□ -0.52
CTSB-228ENST00000533455 Q96MF0 132 aa11.8□□□□□ -0.52
CTSB-228ENST00000533455 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
CTSB-228ENST00000533455 IMUPQ9GZP8 106 aa11.8□□□□□ -0.52
CTSB-228ENST00000533455 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
CTSB-228ENST00000533455 UBE2L6O14933 153 aa11.78□□□□□ -0.52
CTSB-228ENST00000533455 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
CTSB-228ENST00000533455 FBN2P35556 2912 aa11.78□□□□□ -0.52
CTSB-228ENST00000533455 USP9YO00507 2555 aaPredicted RBP11.78□□□□□ -0.52
CTSB-228ENST00000533455 TRAV13-2A0A0B4J235 113 aa11.77□□□□□ -0.52
CTSB-228ENST00000533455 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.52
CTSB-228ENST00000533455 RPL28P46779 137 aaKnown RBP11.77□□□□□ -0.52
CTSB-228ENST00000533455 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.52
CTSB-228ENST00000533455 HIST2H2BDQ6DRA6 164 aa11.77□□□□□ -0.52
CTSB-228ENST00000533455 SDIM1Q6ZPB5 146 aa11.77□□□□□ -0.52
CTSB-228ENST00000533455 TMEM86BQ8N661 226 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms