RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
SF3B2-213ENST00000533421 YPEL4Q96NS1 127 aa8.07□□□□□ -1.12
SF3B2-213ENST00000533421 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
SF3B2-213ENST00000533421 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
SF3B2-213ENST00000533421 LRP1BQ9NZR2 4599 aa8.07□□□□□ -1.12
SF3B2-213ENST00000533421 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.06□□□□□ -1.12
SF3B2-213ENST00000533421 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 SCO1O75880 301 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 PPBPP02775 128 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
SF3B2-213ENST00000533421 FABP9Q0Z7S8 132 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 RNASE13Q5GAN3 156 aaKnown RBP8.06□□□□□ -1.12
SF3B2-213ENST00000533421 GNB1LQ9BYB4 327 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 PRR34Q9NV39 138 aa8.06□□□□□ -1.12
SF3B2-213ENST00000533421 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
SF3B2-213ENST00000533421 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
SF3B2-213ENST00000533421 XGP55808 180 aa8.05□□□□□ -1.12
SF3B2-213ENST00000533421 KIR2DL4Q99706 377 aa8.05□□□□□ -1.12
SF3B2-213ENST00000533421 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
SF3B2-213ENST00000533421 PHOX2AO14813 284 aa8.04□□□□□ -1.12
SF3B2-213ENST00000533421 REG3AQ06141 175 aa8.04□□□□□ -1.12
SF3B2-213ENST00000533421 TRAPPC1Q9Y5R8 145 aa8.04□□□□□ -1.12
SF3B2-213ENST00000533421 H7C423 109 aa8.03□□□□□ -1.12
SF3B2-213ENST00000533421 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-213ENST00000533421 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
SF3B2-213ENST00000533421 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-213ENST00000533421 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-213ENST00000533421 SMCO4Q9NRQ5 59 aa8.03□□□□□ -1.12
SF3B2-213ENST00000533421 Q5VSD8 79 aa8.02□□□□□ -1.13
SF3B2-213ENST00000533421 Q6ZUT4 128 aa8.02□□□□□ -1.13
SF3B2-213ENST00000533421 Q8N8P6 123 aa8.02□□□□□ -1.13
SF3B2-213ENST00000533421 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
SF3B2-213ENST00000533421 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
SF3B2-213ENST00000533421 UBE2D4Q9Y2X8 147 aa8.02□□□□□ -1.13
SF3B2-213ENST00000533421 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
SF3B2-213ENST00000533421 USP17L23D6RBM5 183 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 MT-ND6P03923 174 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 RAB5AP20339 215 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 SMAGPQ0VAQ4 97 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 DGAT2L7PQ6IED9 249 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 KRTAP26-1Q6PEX3 210 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 LAMTOR2Q9Y2Q5 125 aa8.01□□□□□ -1.13
SF3B2-213ENST00000533421 PRSS47A8MTI9 375 aa8□□□□□ -1.13
SF3B2-213ENST00000533421 ZNF25P17030 456 aaPredicted RBP8□□□□□ -1.13
SF3B2-213ENST00000533421 COX19Q49B96 90 aa8□□□□□ -1.13
SF3B2-213ENST00000533421 GAGE12HA6NDE8 117 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 CFAP161Q6P656 301 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 Q6ZSA8 131 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
SF3B2-213ENST00000533421 ZNF664Q8N3J9 261 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 PRSS3P2Q8NHM4 247 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 CDC42SE2Q9NRR3 84 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 HERC1Q15751 4861 aa7.99□□□□□ -1.13
SF3B2-213ENST00000533421 DNAH8Q96JB1 4490 aa7.98□□□□□ -1.13
SF3B2-213ENST00000533421 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
SF3B2-213ENST00000533421 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.97□□□□□ -1.13
SF3B2-213ENST00000533421 LINC00959A0A1B0GUT2 108 aa7.97□□□□□ -1.13
SF3B2-213ENST00000533421 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
SF3B2-213ENST00000533421 INAFM2P0DMQ5 153 aa7.97□□□□□ -1.13
SF3B2-213ENST00000533421 XCL1P47992 114 aa7.97□□□□□ -1.13
SF3B2-213ENST00000533421 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
SF3B2-213ENST00000533421 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
SF3B2-213ENST00000533421 CHCHD10Q8WYQ3 142 aaPredicted RBP7.97□□□□□ -1.13
SF3B2-213ENST00000533421 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
SF3B2-213ENST00000533421 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
SF3B2-213ENST00000533421 TRAV13-1A0A0B4J241 112 aa7.96□□□□□ -1.14
SF3B2-213ENST00000533421 COLCA2A8K830 154 aa7.96□□□□□ -1.14
SF3B2-213ENST00000533421 CCL25O15444 150 aa7.96□□□□□ -1.14
SF3B2-213ENST00000533421 LINC01620Q4KN68 170 aa7.96□□□□□ -1.14
SF3B2-213ENST00000533421 TMEM18Q96B42 140 aa7.96□□□□□ -1.14
SF3B2-213ENST00000533421 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
SF3B2-213ENST00000533421 IGLV4-3A0A075B6K6 122 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 TRGC2P03986 189 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 PRSS1P07477 247 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 HAMPP81172 84 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 FA2HQ7L5A8 372 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 CHAC1Q9BUX1 264 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 CYSLTR1Q9Y271 337 aa7.95□□□□□ -1.14
SF3B2-213ENST00000533421 ATP6V1G1O75348 118 aa7.94□□□□□ -1.14
SF3B2-213ENST00000533421 CNBPP62633 177 aaKnown RBP7.94□□□□□ -1.14
SF3B2-213ENST00000533421 C9orf163Q8N9P6 203 aa7.94□□□□□ -1.14
SF3B2-213ENST00000533421 SPANXA1Q9NS26 97 aa7.94□□□□□ -1.14
SF3B2-213ENST00000533421 IFITM10A6NMD0 228 aa7.93□□□□□ -1.14
SF3B2-213ENST00000533421 FOXI1Q12951 378 aa7.93□□□□□ -1.14
SF3B2-213ENST00000533421 HIGD2BQ4VC39 106 aa7.93□□□□□ -1.14
SF3B2-213ENST00000533421 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
SF3B2-213ENST00000533421 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
SF3B2-213ENST00000533421 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
SF3B2-213ENST00000533421 CSDC2Q9Y534 153 aaKnown RBP7.93□□□□□ -1.14
SF3B2-213ENST00000533421 SS18Q15532 418 aa7.92□□□□□ -1.14
SF3B2-213ENST00000533421 C15orf56Q8N910 161 aa7.92□□□□□ -1.14
SF3B2-213ENST00000533421 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms