RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PROK1P58294 105 aa10.87□□□□□ -0.67
NXF1-213ENST00000532297 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
NXF1-213ENST00000532297 Q9UF83 564 aa10.87□□□□□ -0.67
NXF1-213ENST00000532297 PYGO1Q9Y3Y4 419 aa10.87□□□□□ -0.67
NXF1-213ENST00000532297 SONP18583 2426 aaKnown RBP10.86□□□□□ -0.67
NXF1-213ENST00000532297 NF1P21359 2839 aa10.86□□□□□ -0.67
NXF1-213ENST00000532297 PSMB8P28062 276 aa10.86□□□□□ -0.67
NXF1-213ENST00000532297 ACYP1P07311 99 aa10.85□□□□□ -0.67
NXF1-213ENST00000532297 RBMY1A1P0DJD3 496 aaKnown RBP10.85□□□□□ -0.67
NXF1-213ENST00000532297 RBMY1CP0DJD4 496 aa10.85□□□□□ -0.67
NXF1-213ENST00000532297 RBMY1FQ15415 496 aaKnown RBP10.85□□□□□ -0.67
NXF1-213ENST00000532297 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
NXF1-213ENST00000532297 CHD6Q8TD26 2715 aa10.85□□□□□ -0.67
NXF1-213ENST00000532297 C9orf153Q5TBE3 101 aa10.85□□□□□ -0.67
NXF1-213ENST00000532297 SETD2Q9BYW2 2564 aaPredicted RBP10.85□□□□□ -0.67
NXF1-213ENST00000532297 NOTCH3Q9UM47 2321 aa10.85□□□□□ -0.67
NXF1-213ENST00000532297 IGHV1OR15-1A0A075B7D0 117 aa10.84□□□□□ -0.67
NXF1-213ENST00000532297 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
NXF1-213ENST00000532297 SMCR5Q8TEV8 140 aa10.84□□□□□ -0.67
NXF1-213ENST00000532297 NBPF19A0A087WUL8 3843 aa10.84□□□□□ -0.67
NXF1-213ENST00000532297 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
NXF1-213ENST00000532297 B4DSR2 109 aa10.83□□□□□ -0.68
NXF1-213ENST00000532297 CITED2Q99967 270 aaPredicted RBP10.83□□□□□ -0.68
NXF1-213ENST00000532297 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
NXF1-213ENST00000532297 PRB1P04280 392 aa10.82□□□□□ -0.68
NXF1-213ENST00000532297 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
NXF1-213ENST00000532297 K7EQG2 157 aa10.82□□□□□ -0.68
NXF1-213ENST00000532297 TIMM17BO60830 172 aa10.81□□□□□ -0.68
NXF1-213ENST00000532297 LINC00643Q86TS7 51 aa10.81□□□□□ -0.68
NXF1-213ENST00000532297 NDUFA7O95182 113 aa10.81□□□□□ -0.68
NXF1-213ENST00000532297 SLURP1P55000 103 aa10.81□□□□□ -0.68
NXF1-213ENST00000532297 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 IGKV2-29A2NJV5 120 aaPredicted RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 COX7A2LO14548 114 aa10.79□□□□□ -0.68
NXF1-213ENST00000532297 HOXD3P31249 432 aaPredicted RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 A0A0U1RRA0 63 aa10.79□□□□□ -0.68
NXF1-213ENST00000532297 UQCRQO14949 82 aa10.79□□□□□ -0.68
NXF1-213ENST00000532297 DAZ2Q13117 558 aaKnown RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 CIRBPQ14011 172 aaKnown RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 DAZ4Q86SG3 579 aaKnown RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 DAZ3Q9NR90 486 aaKnown RBP10.79□□□□□ -0.68
NXF1-213ENST00000532297 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
NXF1-213ENST00000532297 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
NXF1-213ENST00000532297 NAV2Q8IVL1 2488 aa10.78□□□□□ -0.68
NXF1-213ENST00000532297 LINC00308Q8TCZ7 52 aa10.78□□□□□ -0.68
NXF1-213ENST00000532297 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
NXF1-213ENST00000532297 DNAJC30Q96LL9 226 aa10.78□□□□□ -0.68
NXF1-213ENST00000532297 NDUFA1O15239 70 aa10.77□□□□□ -0.68
NXF1-213ENST00000532297 HERVK_113P63121 156 aa10.77□□□□□ -0.68
NXF1-213ENST00000532297 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
NXF1-213ENST00000532297 LOC107984640A0A0U1RRK4 108 aa10.77□□□□□ -0.69
NXF1-213ENST00000532297 RBMY1BA6NDE4 496 aaKnown RBP10.77□□□□□ -0.69
NXF1-213ENST00000532297 RBMY1EA6NEQ0 496 aaKnown RBP10.77□□□□□ -0.69
NXF1-213ENST00000532297 RBMY1DP0C7P1 496 aaKnown RBP10.77□□□□□ -0.69
NXF1-213ENST00000532297 LINC00526Q96FQ7 95 aa10.77□□□□□ -0.69
NXF1-213ENST00000532297 JMJD1CQ15652 2540 aa10.77□□□□□ -0.69
NXF1-213ENST00000532297 CR1P17927 2039 aa10.76□□□□□ -0.69
NXF1-213ENST00000532297 Q8N2B8 174 aa10.76□□□□□ -0.69
NXF1-213ENST00000532297 KLK5Q9Y337 293 aaPredicted RBP10.76□□□□□ -0.69
NXF1-213ENST00000532297 TMEM89A2RUT3 159 aa10.76□□□□□ -0.69
NXF1-213ENST00000532297 BAALC-AS2P0C853 105 aa10.76□□□□□ -0.69
NXF1-213ENST00000532297 DEFB131AP59861 70 aa10.76□□□□□ -0.69
NXF1-213ENST00000532297 Q6ZSN1 163 aa10.76□□□□□ -0.69
NXF1-213ENST00000532297 IGHV3-38A0A0C4DH36 116 aa10.75□□□□□ -0.69
NXF1-213ENST00000532297 KHDC1LQ5JSQ8 128 aa10.75□□□□□ -0.69
NXF1-213ENST00000532297 LINC00467Q9BRT7 94 aa10.75□□□□□ -0.69
NXF1-213ENST00000532297 Q9H8V8 135 aa10.75□□□□□ -0.69
NXF1-213ENST00000532297 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
NXF1-213ENST00000532297 KRTAP10-9P60411 292 aa10.75□□□□□ -0.69
NXF1-213ENST00000532297 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
NXF1-213ENST00000532297 ATP5G1P05496 136 aa10.74□□□□□ -0.69
NXF1-213ENST00000532297 EDA2RQ9HAV5 297 aa10.74□□□□□ -0.69
NXF1-213ENST00000532297 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.74□□□□□ -0.69
NXF1-213ENST00000532297 ZNF702PQ9H963 129 aa10.74□□□□□ -0.69
NXF1-213ENST00000532297 PEMTQ9UBM1 199 aa10.74□□□□□ -0.69
NXF1-213ENST00000532297 CSDC2Q9Y534 153 aaKnown RBP10.74□□□□□ -0.69
NXF1-213ENST00000532297 TIRAPP58753 221 aa10.73□□□□□ -0.69
NXF1-213ENST00000532297 SDIM1Q6ZPB5 146 aa10.73□□□□□ -0.69
NXF1-213ENST00000532297 LINC01356Q8N9X3 169 aa10.73□□□□□ -0.69
NXF1-213ENST00000532297 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
NXF1-213ENST00000532297 C11orf44Q8N8P7 122 aa10.73□□□□□ -0.69
NXF1-213ENST00000532297 TRACP01848 142 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 CXCL5P42830 114 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 BEAN1Q3B7T3 259 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 SOSTDC1Q6X4U4 206 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 A0A096LNT2 108 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 COX7CP15954 63 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 DSCR9P59020 149 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 COX6A2Q02221 97 aa10.72□□□□□ -0.69
NXF1-213ENST00000532297 UBE2E2Q96LR5 201 aa10.71□□□□□ -0.69
NXF1-213ENST00000532297 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
NXF1-213ENST00000532297 C22orf24Q9Y442 160 aa10.71□□□□□ -0.69
NXF1-213ENST00000532297 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.7
NXF1-213ENST00000532297 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
NXF1-213ENST00000532297 J3KT08 172 aa10.7□□□□□ -0.7
NXF1-213ENST00000532297 SETXQ7Z333 2677 aaKnown RBP10.7□□□□□ -0.7
NXF1-213ENST00000532297 APCP25054 2843 aa10.69□□□□□ -0.7
NXF1-213ENST00000532297 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
NXF1-213ENST00000532297 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms