RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 CSDC2Q9Y534 153 aaKnown RBP14.87□□□□□ -0.03
LRRK1-208ENST00000532029 IGKV3OR2-268A0A0C4DH90 116 aa14.86□□□□□ -0.03
LRRK1-208ENST00000532029 ATP6V1G1O75348 118 aa14.86□□□□□ -0.03
LRRK1-208ENST00000532029 FA2HQ7L5A8 372 aa14.86□□□□□ -0.03
LRRK1-208ENST00000532029 DNAH17Q9UFH2 4485 aa14.86□□□□□ -0.03
LRRK1-208ENST00000532029 TRAV8-4A0A0B4J246 113 aa14.85□□□□□ -0.03
LRRK1-208ENST00000532029 ZNF664Q8N3J9 261 aa14.85□□□□□ -0.03
LRRK1-208ENST00000532029 CDC42SE2Q9NRR3 84 aa14.85□□□□□ -0.03
LRRK1-208ENST00000532029 SPANXA1Q9NS26 97 aa14.85□□□□□ -0.03
LRRK1-208ENST00000532029 CYSLTR1Q9Y271 337 aa14.85□□□□□ -0.03
LRRK1-208ENST00000532029 EREGO14944 169 aa14.84□□□□□ -0.03
LRRK1-208ENST00000532029 G0S2P27469 103 aa14.84□□□□□ -0.03
LRRK1-208ENST00000532029 C18orf32Q8TCD1 76 aa14.84□□□□□ -0.03
LRRK1-208ENST00000532029 IGLV10-54A0A075B6I4 117 aa14.83□□□□□ -0.04
LRRK1-208ENST00000532029 C2orf66Q6UXQ4 117 aa14.83□□□□□ -0.04
LRRK1-208ENST00000532029 TRGC2P03986 189 aa14.82□□□□□ -0.04
LRRK1-208ENST00000532029 FRAS1Q86XX4 4008 aa14.82□□□□□ -0.04
LRRK1-208ENST00000532029 A0A087WTM6 91 aa14.81□□□□□ -0.04
LRRK1-208ENST00000532029 Q6ZUT4 128 aa14.81□□□□□ -0.04
LRRK1-208ENST00000532029 LINC01546A6NGU7 62 aa14.8□□□□□ -0.04
LRRK1-208ENST00000532029 RAB5BP61020 215 aa14.8□□□□□ -0.04
LRRK1-208ENST00000532029 PYGO1Q9Y3Y4 419 aa14.8□□□□□ -0.04
LRRK1-208ENST00000532029 A0A1B0GVY2 172 aa14.79□□□□□ -0.04
LRRK1-208ENST00000532029 RNASE13Q5GAN3 156 aaKnown RBP14.79□□□□□ -0.04
LRRK1-208ENST00000532029 AP5S1Q9NUS5 200 aa14.79□□□□□ -0.04
LRRK1-208ENST00000532029 LINC00614P0C842 121 aa14.78□□□□□ -0.04
LRRK1-208ENST00000532029 MRPS36P82909 103 aaKnown RBP14.78□□□□□ -0.04
LRRK1-208ENST00000532029 SS18Q15532 418 aa14.78□□□□□ -0.04
LRRK1-208ENST00000532029 MAPKAPK5-AS1Q8N8E1 139 aa14.78□□□□□ -0.04
LRRK1-208ENST00000532029 BAALCQ8WXS3 180 aa14.78□□□□□ -0.04
LRRK1-208ENST00000532029 FAT2Q9NYQ8 4349 aa14.77□□□□□ -0.04
LRRK1-208ENST00000532029 LINC00959A0A1B0GUT2 108 aa14.77□□□□□ -0.05
LRRK1-208ENST00000532029 LRCOL1A6NCL2 159 aa14.77□□□□□ -0.05
LRRK1-208ENST00000532029 OPRPNQ99935 248 aaPredicted RBP14.77□□□□□ -0.05
LRRK1-208ENST00000532029 KRTAP26-1Q6PEX3 210 aa14.76□□□□□ -0.05
LRRK1-208ENST00000532029 CHCHD10Q8WYQ3 142 aaPredicted RBP14.76□□□□□ -0.05
LRRK1-208ENST00000532029 TOMM6Q96B49 74 aa14.76□□□□□ -0.05
LRRK1-208ENST00000532029 GAGE12HA6NDE8 117 aa14.75□□□□□ -0.05
LRRK1-208ENST00000532029 LINC01549A6NIU2 74 aa14.75□□□□□ -0.05
LRRK1-208ENST00000532029 LECT2O14960 151 aa14.75□□□□□ -0.05
LRRK1-208ENST00000532029 URB1-AS1Q96HZ7 61 aa14.75□□□□□ -0.05
LRRK1-208ENST00000532029 IGLV4-3A0A075B6K6 122 aa14.74□□□□□ -0.05
LRRK1-208ENST00000532029 TRAV13-1A0A0B4J241 112 aa14.74□□□□□ -0.05
LRRK1-208ENST00000532029 Q6ZN92 141 aa14.74□□□□□ -0.05
LRRK1-208ENST00000532029 TMEM141Q96I45 108 aa14.74□□□□□ -0.05
LRRK1-208ENST00000532029 C1orf196B1AJZ1 125 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 CCL25O15444 150 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 NPSP0C0P6 89 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 XCL1P47992 114 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 WFDC2Q14508 124 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 SPATA12Q7Z6I5 190 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 BAGE3Q86Y29 109 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 FAM104AQ969W3 186 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 SCGB3A1Q96QR1 104 aa14.73□□□□□ -0.05
LRRK1-208ENST00000532029 IGIPA6NJ69 53 aa14.72□□□□□ -0.05
LRRK1-208ENST00000532029 IFITM10A6NMD0 228 aa14.72□□□□□ -0.05
LRRK1-208ENST00000532029 TIMM17AQ99595 171 aa14.72□□□□□ -0.05
LRRK1-208ENST00000532029 PAPPA-AS1Q5QFB9 102 aa14.71□□□□□ -0.05
LRRK1-208ENST00000532029 TEX43Q6ZNM6 134 aa14.71□□□□□ -0.05
LRRK1-208ENST00000532029 ERASQ7Z444 233 aa14.71□□□□□ -0.05
LRRK1-208ENST00000532029 Q8N814 137 aa14.71□□□□□ -0.05
LRRK1-208ENST00000532029 CHCHD1Q96BP2 118 aaKnown RBP14.71□□□□□ -0.05
LRRK1-208ENST00000532029 C14orf177Q52M58 125 aa14.7□□□□□ -0.06
LRRK1-208ENST00000532029 C2orf88Q9BSF0 95 aa14.7□□□□□ -0.06
LRRK1-208ENST00000532029 VCX2Q9H322 139 aa14.7□□□□□ -0.06
LRRK1-208ENST00000532029 USP17L23D6RBM5 183 aa14.69□□□□□ -0.06
LRRK1-208ENST00000532029 HBDP02042 147 aa14.69□□□□□ -0.06
LRRK1-208ENST00000532029 KRTAP10-2P60368 255 aa14.68□□□□□ -0.06
LRRK1-208ENST00000532029 FOXI1Q12951 378 aa14.68□□□□□ -0.06
LRRK1-208ENST00000532029 CD164L2Q6UWJ8 174 aa14.68□□□□□ -0.06
LRRK1-208ENST00000532029 PGPEP1Q9NXJ5 209 aa14.68□□□□□ -0.06
LRRK1-208ENST00000532029 PMCHL1Q16048 86 aa14.67□□□□□ -0.06
LRRK1-208ENST00000532029 CFAP161Q6P656 301 aa14.66□□□□□ -0.06
LRRK1-208ENST00000532029 NTN5Q8WTR8 489 aaPredicted RBP14.66□□□□□ -0.06
LRRK1-208ENST00000532029 AMELXQ99217 191 aa14.66□□□□□ -0.06
LRRK1-208ENST00000532029 A0A096LNJ9 63 aa14.65□□□□□ -0.06
LRRK1-208ENST00000532029 HSBP1O75506 76 aa14.65□□□□□ -0.06
LRRK1-208ENST00000532029 CDPF1Q6NVV7 123 aa14.65□□□□□ -0.06
LRRK1-208ENST00000532029 PKD1P98161 4303 aa14.65□□□□□ -0.06
LRRK1-208ENST00000532029 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.64□□□□□ -0.07
LRRK1-208ENST00000532029 ZC2HC1BQ5TFG8 222 aa14.64□□□□□ -0.07
LRRK1-208ENST00000532029 LINC00173Q6ZV60 143 aa14.64□□□□□ -0.07
LRRK1-208ENST00000532029 HECTD4Q9Y4D8 3996 aa14.64□□□□□ -0.07
LRRK1-208ENST00000532029 IGLV5-52A0A0A0MRZ9 124 aa14.63□□□□□ -0.07
LRRK1-208ENST00000532029 C16orf90A8MZG2 172 aa14.63□□□□□ -0.07
LRRK1-208ENST00000532029 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.63□□□□□ -0.07
LRRK1-208ENST00000532029 DNAH11Q96DT5 4516 aa14.63□□□□□ -0.07
LRRK1-208ENST00000532029 COX7A2LO14548 114 aa14.62□□□□□ -0.07
LRRK1-208ENST00000532029 SERF1AO75920 110 aa14.62□□□□□ -0.07
LRRK1-208ENST00000532029 FUSP35637 526 aaKnown RBP eCLIP14.62□□□□□ -0.07
LRRK1-208ENST00000532029 UBE2D1P51668 147 aa14.62□□□□□ -0.07
LRRK1-208ENST00000532029 ATP5LO75964 103 aa14.61□□□□□ -0.07
LRRK1-208ENST00000532029 MALP21145 153 aa14.61□□□□□ -0.07
LRRK1-208ENST00000532029 PDZD11Q5EBL8 140 aa14.61□□□□□ -0.07
LRRK1-208ENST00000532029 hDV102S1A0JD36 115 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BKO60814 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BJP06899 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BOP23527 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BBP33778 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BDP58876 126 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms