RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 XGP55808 180 aa12.35□□□□□ -0.43
PUF60-218ENST00000531995 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
PUF60-218ENST00000531995 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
PUF60-218ENST00000531995 MAP1LC3AQ9H492 121 aa12.35□□□□□ -0.43
PUF60-218ENST00000531995 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
PUF60-218ENST00000531995 FCER1GP30273 86 aa12.34□□□□□ -0.43
PUF60-218ENST00000531995 HAMPP81172 84 aa12.34□□□□□ -0.43
PUF60-218ENST00000531995 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
PUF60-218ENST00000531995 Q8N8P6 123 aa12.34□□□□□ -0.43
PUF60-218ENST00000531995 MRPL52Q86TS9 123 aaKnown RBP12.33□□□□□ -0.44
PUF60-218ENST00000531995 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.44
PUF60-218ENST00000531995 INAFM2P0DMQ5 153 aa12.32□□□□□ -0.44
PUF60-218ENST00000531995 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
PUF60-218ENST00000531995 LRCOL1A6NCL2 159 aa12.31□□□□□ -0.44
PUF60-218ENST00000531995 IFI27P40305 119 aaPredicted RBP12.31□□□□□ -0.44
PUF60-218ENST00000531995 CLPSL2Q6UWE3 100 aa12.31□□□□□ -0.44
PUF60-218ENST00000531995 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
PUF60-218ENST00000531995 RPL39P62891 51 aaKnown RBP12.3□□□□□ -0.44
PUF60-218ENST00000531995 REG3AQ06141 175 aa12.3□□□□□ -0.44
PUF60-218ENST00000531995 Q0VG73 95 aa12.3□□□□□ -0.44
PUF60-218ENST00000531995 RNASEKQ6P5S7 137 aaKnown RBP12.3□□□□□ -0.44
PUF60-218ENST00000531995 UBE2D4Q9Y2X8 147 aa12.3□□□□□ -0.44
PUF60-218ENST00000531995 COLCA2A8K830 154 aa12.29□□□□□ -0.44
PUF60-218ENST00000531995 SCO1O75880 301 aa12.29□□□□□ -0.44
PUF60-218ENST00000531995 SMR3BP02814 79 aaPredicted RBP12.29□□□□□ -0.44
PUF60-218ENST00000531995 ZNF25P17030 456 aaPredicted RBP12.29□□□□□ -0.44
PUF60-218ENST00000531995 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
PUF60-218ENST00000531995 CDC42SE2Q9NRR3 84 aa12.29□□□□□ -0.44
PUF60-218ENST00000531995 SRRM2Q9UQ35 2752 aaKnown RBP12.29□□□□□ -0.44
PUF60-218ENST00000531995 MIAQ16674 131 aa12.28□□□□□ -0.44
PUF60-218ENST00000531995 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
PUF60-218ENST00000531995 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
PUF60-218ENST00000531995 FLG2Q5D862 2391 aaPredicted RBP12.28□□□□□ -0.44
PUF60-218ENST00000531995 DNAH8Q96JB1 4490 aa12.27□□□□□ -0.44
PUF60-218ENST00000531995 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 LINC01546A6NGU7 62 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 CRPP02741 224 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 RAB5AP20339 215 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 GCSHP23434 173 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 WFDC2Q14508 124 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 TIMM21Q9BVV7 248 aa12.27□□□□□ -0.45
PUF60-218ENST00000531995 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.45
PUF60-218ENST00000531995 PSCAO43653 123 aa12.26□□□□□ -0.45
PUF60-218ENST00000531995 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
PUF60-218ENST00000531995 OR5A1Q8NGJ0 315 aa12.26□□□□□ -0.45
PUF60-218ENST00000531995 IGLV5-52A0A0A0MRZ9 124 aa12.25□□□□□ -0.45
PUF60-218ENST00000531995 RMI2Q96E14 147 aa12.25□□□□□ -0.45
PUF60-218ENST00000531995 URB1-AS1Q96HZ7 61 aa12.25□□□□□ -0.45
PUF60-218ENST00000531995 TMEM101Q96IK0 257 aa12.25□□□□□ -0.45
PUF60-218ENST00000531995 IGLV10-54A0A075B6I4 117 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 K7EMI3 77 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 C18orf32Q8TCD1 76 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 TMEM18Q96B42 140 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 OPRPNQ99935 248 aaPredicted RBP12.24□□□□□ -0.45
PUF60-218ENST00000531995 C1orf43Q9BWL3 253 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
PUF60-218ENST00000531995 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
PUF60-218ENST00000531995 Q6ZUT4 128 aa12.23□□□□□ -0.45
PUF60-218ENST00000531995 BAALCQ8WXS3 180 aa12.23□□□□□ -0.45
PUF60-218ENST00000531995 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
PUF60-218ENST00000531995 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
PUF60-218ENST00000531995 RNASE13Q5GAN3 156 aaKnown RBP12.22□□□□□ -0.45
PUF60-218ENST00000531995 LINC00959A0A1B0GUT2 108 aa12.21□□□□□ -0.45
PUF60-218ENST00000531995 TRGC2P03986 189 aa12.21□□□□□ -0.45
PUF60-218ENST00000531995 DGAT2L7PQ6IED9 249 aa12.21□□□□□ -0.45
PUF60-218ENST00000531995 C2orf66Q6UXQ4 117 aa12.21□□□□□ -0.45
PUF60-218ENST00000531995 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
PUF60-218ENST00000531995 PYGO1Q9Y3Y4 419 aa12.21□□□□□ -0.45
PUF60-218ENST00000531995 LECT2O14960 151 aa12.2□□□□□ -0.46
PUF60-218ENST00000531995 MRPS36P82909 103 aaKnown RBP12.2□□□□□ -0.46
PUF60-218ENST00000531995 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
PUF60-218ENST00000531995 IGIPA6NJ69 53 aa12.19□□□□□ -0.46
PUF60-218ENST00000531995 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
PUF60-218ENST00000531995 Q8N814 137 aa12.19□□□□□ -0.46
PUF60-218ENST00000531995 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
PUF60-218ENST00000531995 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
PUF60-218ENST00000531995 NTN5Q8WTR8 489 aaPredicted RBP12.18□□□□□ -0.46
PUF60-218ENST00000531995 CHCHD10Q8WYQ3 142 aaPredicted RBP12.18□□□□□ -0.46
PUF60-218ENST00000531995 TOMM6Q96B49 74 aa12.18□□□□□ -0.46
PUF60-218ENST00000531995 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
PUF60-218ENST00000531995 LINC00614P0C842 121 aa12.17□□□□□ -0.46
PUF60-218ENST00000531995 FA2HQ7L5A8 372 aa12.17□□□□□ -0.46
PUF60-218ENST00000531995 A0A096LNJ9 63 aa12.16□□□□□ -0.46
PUF60-218ENST00000531995 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
PUF60-218ENST00000531995 S100A1P23297 94 aa12.16□□□□□ -0.46
PUF60-218ENST00000531995 FOXI1Q12951 378 aa12.16□□□□□ -0.46
PUF60-218ENST00000531995 CCL25O15444 150 aa12.15□□□□□ -0.46
PUF60-218ENST00000531995 ZC2HC1BQ5TFG8 222 aa12.15□□□□□ -0.46
PUF60-218ENST00000531995 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
PUF60-218ENST00000531995 USP17L23D6RBM5 183 aa12.14□□□□□ -0.47
PUF60-218ENST00000531995 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
PUF60-218ENST00000531995 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
PUF60-218ENST00000531995 G0S2P27469 103 aa12.13□□□□□ -0.47
PUF60-218ENST00000531995 XCL1P47992 114 aa12.13□□□□□ -0.47
PUF60-218ENST00000531995 SS18Q15532 418 aa12.13□□□□□ -0.47
PUF60-218ENST00000531995 AMELXQ99217 191 aa12.13□□□□□ -0.47
PUF60-218ENST00000531995 AP5S1Q9NUS5 200 aa12.13□□□□□ -0.47
PUF60-218ENST00000531995 C1orf196B1AJZ1 125 aa12.12□□□□□ -0.47
PUF60-218ENST00000531995 NPSP0C0P6 89 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms