RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 NWD2Q9ULI1 1742 aa-0.72□□□□□ -2.52
PATL1-202ENST00000531919 WDR7Q9Y4E6 1490 aa-0.72□□□□□ -2.52
PATL1-202ENST00000531919 PIGYQ3MUY2 71 aa-0.72□□□□□ -2.52
PATL1-202ENST00000531919 CFAP126Q5VTH2 177 aa-0.72□□□□□ -2.52
PATL1-202ENST00000531919 BAGE3Q86Y29 109 aa-0.72□□□□□ -2.52
PATL1-202ENST00000531919 MMGT1Q8N4V1 131 aa-0.72□□□□□ -2.52
PATL1-202ENST00000531919 RYR2Q92736 4967 aa-0.72□□□□□ -2.53
PATL1-202ENST00000531919 TNRC18O15417 2968 aaPredicted RBP-0.72□□□□□ -2.53
PATL1-202ENST00000531919 CUBNO60494 3623 aa-0.72□□□□□ -2.53
PATL1-202ENST00000531919 PRRC2CQ9Y520 2896 aaKnown RBP-0.73□□□□□ -2.53
PATL1-202ENST00000531919 RNF213Q63HN8 5207 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 DNAH11Q96DT5 4516 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 FXYD6-FXYD2A0A087WZ82 144 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 NPFFO15130 113 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 NCR2O95944 276 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 NEFHP12036 1026 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 CCL18P55774 89 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 ZNF818PQ6ZRF7 136 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 AGPAT4-IT1Q9H0P7 198 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 AKAP9Q99996 3911 aa-0.73□□□□□ -2.53
PATL1-202ENST00000531919 ERCC6L2Q5T890 1561 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 LRRC37A2A6NM11 1700 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 CEP152O94986 1710 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 IFNA17P01571 189 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 SMIM6P0DI80 62 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 DEFB135Q30KP9 77 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 MAFIPQ8WZ33 124 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 SMIM3Q9BZL3 60 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 LINC00312Q9Y6C7 94 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 ZNF236Q9UL36 1845 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 APOBP04114 4563 aaKnown RBP-0.74□□□□□ -2.53
PATL1-202ENST00000531919 MYH8P13535 1937 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 ANKRD30AQ9BXX3 1397 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 FHAD1B1AJZ9 1412 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 NSD3Q9BZ95 1437 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 ANK3Q12955 4377 aaKnown RBP-0.74□□□□□ -2.53
PATL1-202ENST00000531919 GAPVD1Q14C86 1478 aa-0.74□□□□□ -2.53
PATL1-202ENST00000531919 ZZEF1O43149 2961 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 ACACAQ13085 2346 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 REV3LO60673 3130 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 PLECQ15149 4684 aaKnown RBP-0.75□□□□□ -2.53
PATL1-202ENST00000531919 LAMA3Q16787 3333 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 AKAP13Q12802 2813 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 M0R135 149 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 DEFB112Q30KQ8 113 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 CTAGE3PQ8IX95 158 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 DEFB105AQ8NG35 78 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 AMELXQ99217 191 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 TULP4Q9NRJ4 1543 aa-0.75□□□□□ -2.53
PATL1-202ENST00000531919 ARPC5O15511 151 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 IL5P05113 134 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 CBLN1P23435 193 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 CKS1BP61024 79 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 CCL8P80075 99 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 SPTSSBQ8NFR3 76 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 SMIM4Q8WVI0 70 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 NPVFQ9HCQ7 196 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 MRC1P22897 1456 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 SPEF2Q9C093 1822 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 DNAH1Q9P2D7 4330 aa-0.76□□□□□ -2.53
PATL1-202ENST00000531919 LYSTQ99698 3801 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 DMXL1Q9Y485 3027 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 SBF2Q86WG5 1849 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 PATJQ8NI35 1801 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 KDM5AP29375 1690 aaKnown RBP-0.77□□□□□ -2.53
PATL1-202ENST00000531919 MYOM3Q5VTT5 1437 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 SPAARA0A1B0GVQ0 90 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 FAM92AA1XBS5 289 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 SIX6O95475 246 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 ALX1Q15699 326 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 S100A7L2Q5SY68 101 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 RPL7L1Q6DKI1 246 aaKnown RBP-0.77□□□□□ -2.53
PATL1-202ENST00000531919 Q6JHZ5 121 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 R4GMQ9 66 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 ANKRD11Q6UB99 2663 aaPredicted RBP-0.77□□□□□ -2.53
PATL1-202ENST00000531919 SACSQ9NZJ4 4579 aa-0.77□□□□□ -2.53
PATL1-202ENST00000531919 PTPN23Q9H3S7 1636 aa-0.78□□□□□ -2.53
PATL1-202ENST00000531919 IFT140Q96RY7 1462 aa-0.78□□□□□ -2.53
PATL1-202ENST00000531919 FAM186AA6NE01 2351 aa-0.78□□□□□ -2.53
PATL1-202ENST00000531919 Q6AWC8 147 aa-0.78□□□□□ -2.53
PATL1-202ENST00000531919 C9orf62Q8N4C0 152 aa-0.78□□□□□ -2.53
PATL1-202ENST00000531919 NDUFB6O95139 128 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 PPP1R17O96001 155 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 TNFP01375 233 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 PIPP12273 146 aaPredicted RBP-0.79□□□□□ -2.54
PATL1-202ENST00000531919 MT1HP80294 61 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 TMEM170BQ5T4T1 132 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 SCIMPQ6UWF3 145 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 PYDC1Q8WXC3 89 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 SPTSSAQ969W0 71 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 SPRR4Q96PI1 79 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 PSMG3Q9BT73 122 aaPredicted RBP-0.79□□□□□ -2.54
PATL1-202ENST00000531919 FXYD6Q9H0Q3 95 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 GSKIPQ9P0R6 139 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 LENEPQ9Y5L5 61 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 PAPPA2Q9BXP8 1791 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 VPS13BQ7Z7G8 4022 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 KIAA0556O60303 1618 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 MGAM2Q2M2H8 2515 aa-0.79□□□□□ -2.54
PATL1-202ENST00000531919 ADAMTS12P58397 1594 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms