RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 BTF3L4Q96K17 158 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 CAMK2N2Q96S95 79 aa4.61□□□□□ -1.67
NXF1-212ENST00000531872 C19orf71A6NCJ1 209 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 BCL2L11O43521 198 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 ESDP10768 282 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 Q5BKY6 102 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 LYZL1Q6UWQ5 148 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 TMUB2Q71RG4 321 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 S100ZQ8WXG8 99 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 RPL39LQ96EH5 51 aaKnown RBP4.6□□□□□ -1.67
NXF1-212ENST00000531872 OPRPNQ99935 248 aaPredicted RBP4.6□□□□□ -1.67
NXF1-212ENST00000531872 RPP21Q9H633 154 aaKnown RBP4.6□□□□□ -1.67
NXF1-212ENST00000531872 CDC42SE2Q9NRR3 84 aa4.6□□□□□ -1.67
NXF1-212ENST00000531872 FAM168BA1KXE4 195 aa4.59□□□□□ -1.67
NXF1-212ENST00000531872 SDHAF1A6NFY7 115 aa4.59□□□□□ -1.67
NXF1-212ENST00000531872 MALP21145 153 aa4.59□□□□□ -1.67
NXF1-212ENST00000531872 RPL35P42766 123 aaKnown RBP4.59□□□□□ -1.67
NXF1-212ENST00000531872 MRPL52Q86TS9 123 aaKnown RBP4.59□□□□□ -1.67
NXF1-212ENST00000531872 C9orf62Q8N4C0 152 aa4.59□□□□□ -1.67
NXF1-212ENST00000531872 CNFNQ9BYD5 112 aa4.59□□□□□ -1.67
NXF1-212ENST00000531872 TMA7Q9Y2S6 64 aaKnown RBP4.59□□□□□ -1.67
NXF1-212ENST00000531872 XKRY2A2RUG3 117 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 C1orf196B1AJZ1 125 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 G3V3Q6 166 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 I3L3M4 83 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 COX7A2LO14548 114 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 PFDN1O60925 122 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 KRTAP7-1Q8IUC3 87 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 MBD3L1Q8WWY6 194 aa4.58□□□□□ -1.68
NXF1-212ENST00000531872 TRBV6-5A0A0K0K1A5 114 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 TSHBP01222 138 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 IFNA1P01562 189 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 PMCHP20382 165 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 CTRLP40313 264 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 DEFA1P59665 94 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 TWIST1Q15672 202 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 TPRXLQ17RH7 258 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 IMMP2LQ96T52 175 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 CYTL1Q9NRR1 136 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 MRPL35Q9NZE8 188 aaKnown RBP4.57□□□□□ -1.68
NXF1-212ENST00000531872 NDUFA13Q9P0J0 144 aa4.57□□□□□ -1.68
NXF1-212ENST00000531872 A0A087X002 238 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 F8WDY8 70 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 ZNF861PO60384 105 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 UBE2BP63146 152 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 SPAG11BQ08648 103 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 CENPWQ5EE01 88 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 TEX261Q6UWH6 196 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
NXF1-212ENST00000531872 KCNRGQ8N5I3 272 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 SFT2D1Q8WV19 159 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 C11orf52Q96A22 123 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 SMIM12Q96EX1 92 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 MRAP2Q96G30 205 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 BATF3Q9NR55 127 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 ALG5Q9Y673 324 aa4.56□□□□□ -1.68
NXF1-212ENST00000531872 M0QXV9 152 aa4.55□□□□□ -1.68
NXF1-212ENST00000531872 FOXA3P55318 350 aaPredicted RBP4.55□□□□□ -1.68
NXF1-212ENST00000531872 C5orf38Q86SI9 138 aa4.55□□□□□ -1.68
NXF1-212ENST00000531872 OR10D4PQ8NGN7 298 aa4.55□□□□□ -1.68
NXF1-212ENST00000531872 TMEM242Q9NWH2 141 aa4.55□□□□□ -1.68
NXF1-212ENST00000531872 FXYD6-FXYD2A0A087WZ82 144 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 A0A1B0GV50 99 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 C7orf77A4D0Y5 90 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 GIPP09681 153 aaPredicted RBP4.54□□□□□ -1.68
NXF1-212ENST00000531872 POLR2KP53803 58 aaKnown RBP4.54□□□□□ -1.68
NXF1-212ENST00000531872 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
NXF1-212ENST00000531872 CCL20P78556 96 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 TMEM241Q24JQ0 296 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 TYMSOSQ8TAI1 123 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 RNASE7Q9H1E1 156 aaKnown RBP4.54□□□□□ -1.68
NXF1-212ENST00000531872 SMDT1Q9H4I9 107 aa4.54□□□□□ -1.68
NXF1-212ENST00000531872 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
NXF1-212ENST00000531872 TRAV13-1A0A0B4J241 112 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 TRBV27A0A0K0K1C4 114 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 RAB19A4D1S5 217 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 NDUFA1O15239 70 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 CRYGAP11844 174 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 GNG4P50150 75 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 SMIM15Q7Z3B0 74 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 FAM213BQ8TBF2 198 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 NUDT11Q96G61 164 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
NXF1-212ENST00000531872 TRBV20OR9-2A0A075B6H5 130 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 UMAD1C9J7I0 102 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 NUPR1O60356 82 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 RNASE13Q5GAN3 156 aaKnown RBP4.52□□□□□ -1.69
NXF1-212ENST00000531872 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 ORAOV1Q8WV07 137 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 ST20Q9HBF5 79 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 BIN3Q9NQY0 253 aa4.52□□□□□ -1.69
NXF1-212ENST00000531872 UBE2D4Q9Y2X8 147 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms