RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 NBEAP1P0C6P0 100 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 MORN2Q502X0 79 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 KCNRGQ8N5I3 272 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 SELENOSQ9BQE4 189 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 APLNQ9ULZ1 77 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 LRRC37A3O60309 1634 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 PLXNB2O15031 1838 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 POLA1P09884 1462 aaPredicted RBP-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 KDM3BQ7LBC6 1761 aa-0.8□□□□□ -2.54
RC3H1-206ENST00000531594 NBPF19A0A087WUL8 3843 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 TMEM2Q9UHN6 1383 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 PBRM1Q86U86 1689 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 USP9XQ93008 2570 aaPredicted RBP-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 PAPPAQ13219 1627 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 TRAV13-2A0A0B4J235 113 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 GNG14A0A1W2PPG7 69 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 F8VRH5 84 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 SYS1-DBNDD2H3BUS1 97 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 APOC3P02656 99 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 DEFB135Q30KP9 77 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 SCIMPQ6UWF3 145 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 DEFB123Q8N688 67 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 LENEPQ9Y5L5 61 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 MYO18BQ8IUG5 2567 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 DISP2A7MBM2 1401 aa-0.81□□□□□ -2.54
RC3H1-206ENST00000531594 DNAH6Q9C0G6 4158 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 TSC2P49815 1807 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 UQCR11O14957 56 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 GUCA1AP43080 201 aaPredicted RBP-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 CKS1BP61024 79 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 Q6AWC8 147 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 SPRR2FQ96RM1 72 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 AMELXQ99217 191 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 GSKIPQ9P0R6 139 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 GVINP1Q7Z2Y8 2422 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 DSPP15924 2871 aaKnown RBP-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 OVOS2A0A0J9YW53 1432 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 OVOS2Q6IE36 1432 aa-0.82□□□□□ -2.54
RC3H1-206ENST00000531594 IFT140Q96RY7 1462 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 DNAH2Q9P225 4427 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 PIGBOS1A0A0B4J2F0 54 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 IGLC7A0M8Q6 106 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 HIST1H1DP16402 221 aaKnown RBP-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 TPPP2P59282 170 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 MAFIPQ8WZ33 124 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 NIPBLQ6KC79 2804 aaeCLIP-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 SPTA1P02549 2419 aa-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 XIRP1Q702N8 1843 aaKnown RBP-0.83□□□□□ -2.54
RC3H1-206ENST00000531594 LRRC37A2A6NM11 1700 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 LAMA3Q16787 3333 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 ZNF236Q9UL36 1845 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 SPAARA0A1B0GVQ0 90 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 NCR2O95944 276 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 TSPAN19P0C672 248 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 ALX1Q15699 326 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 TSTD1Q8NFU3 115 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 LINC01558Q9Y6Z2 57 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 BICRAQ9NZM4 1560 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 KIAA0100Q14667 2235 aaKnown RBP-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 CELSR3Q9NYQ7 3312 aa-0.84□□□□□ -2.54
RC3H1-206ENST00000531594 PI4KAP42356 2102 aa-0.85□□□□□ -2.54
RC3H1-206ENST00000531594 GAPVD1Q14C86 1478 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 ZNF518AQ6AHZ1 1483 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 TRBV7-4A0A0J9YYF1 115 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 CPSF4LA6NMK7 179 aaKnown RBP-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 ARPC5O15511 151 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 COX8AP10176 69 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 COPZ1P61923 177 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 FDCSPQ8NFU4 85 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 TSLPQ969D9 159 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 TPT1P8Q9HAU6 139 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 DYNLRB1Q9NP97 96 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 NDUFA4L2Q9NRX3 87 aa-0.85□□□□□ -2.55
RC3H1-206ENST00000531594 PCNX1Q96RV3 2341 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 SHANK2Q9UPX8 1470 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 FAT3Q8TDW7 4589 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 TACC2O95359 2948 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 PPIP5K1Q6PFW1 1433 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 NSD3Q9BZ95 1437 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 ABCA13Q86UQ4 5058 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 SFT2D2O95562 160 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 IFNGP01579 166 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 UBA52P62987 128 aaKnown RBP-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 DEFA5Q01523 94 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 DEFB112Q30KQ8 113 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 TMEM263Q8WUH6 116 aaKnown RBP-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 LZICQ8WZA0 190 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 USMG5Q96IX5 58 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 MGST2Q99735 147 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 PLECQ15149 4684 aaKnown RBP-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 PKHD1L1Q86WI1 4243 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 PXDNQ92626 1479 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 PRDM2Q13029 1718 aa-0.86□□□□□ -2.55
RC3H1-206ENST00000531594 ADGRB1O14514 1584 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 TRBV7-3A0A075B6L6 115 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 LINC00959A0A1B0GUT2 108 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 SCGB1A1P11684 91 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 S100A5P33763 92 aa-0.87□□□□□ -2.55
RC3H1-206ENST00000531594 SMCO1Q147U7 214 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms