RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
HIPK3-205ENST00000531504 PPP1R17O96001 155 aa12.71□□□□□ -0.37
HIPK3-205ENST00000531504 CRPP02741 224 aa12.71□□□□□ -0.37
HIPK3-205ENST00000531504 TRGC2P03986 189 aa12.71□□□□□ -0.37
HIPK3-205ENST00000531504 C9orf163Q8N9P6 203 aa12.71□□□□□ -0.37
HIPK3-205ENST00000531504 PRELID3AQ96N28 172 aa12.71□□□□□ -0.37
HIPK3-205ENST00000531504 USP17L23D6RBM5 183 aa12.7□□□□□ -0.38
HIPK3-205ENST00000531504 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
HIPK3-205ENST00000531504 LAMTOR2Q9Y2Q5 125 aa12.7□□□□□ -0.38
HIPK3-205ENST00000531504 PHOX2AO14813 284 aa12.69□□□□□ -0.38
HIPK3-205ENST00000531504 NRACQ8N912 160 aa12.69□□□□□ -0.38
HIPK3-205ENST00000531504 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
HIPK3-205ENST00000531504 ALKBH7Q9BT30 221 aaPredicted RBP12.69□□□□□ -0.38
HIPK3-205ENST00000531504 Q9UF83 564 aa12.69□□□□□ -0.38
HIPK3-205ENST00000531504 TRBV6-5A0A0K0K1A5 114 aa12.68□□□□□ -0.38
HIPK3-205ENST00000531504 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
HIPK3-205ENST00000531504 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
HIPK3-205ENST00000531504 NPYP01303 97 aa12.67□□□□□ -0.38
HIPK3-205ENST00000531504 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
HIPK3-205ENST00000531504 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
HIPK3-205ENST00000531504 PRSS1P07477 247 aa12.66□□□□□ -0.38
HIPK3-205ENST00000531504 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
HIPK3-205ENST00000531504 ST20Q9HBF5 79 aa12.66□□□□□ -0.38
HIPK3-205ENST00000531504 TRBV7-3A0A075B6L6 115 aa12.65□□□□□ -0.38
HIPK3-205ENST00000531504 PANO1I0J062 215 aa12.65□□□□□ -0.38
HIPK3-205ENST00000531504 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
HIPK3-205ENST00000531504 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
HIPK3-205ENST00000531504 ENHOQ6UWT2 76 aa12.64□□□□□ -0.39
HIPK3-205ENST00000531504 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
HIPK3-205ENST00000531504 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
HIPK3-205ENST00000531504 UBE2D3P61077 147 aa12.63□□□□□ -0.39
HIPK3-205ENST00000531504 UBE2D2P62837 147 aa12.63□□□□□ -0.39
HIPK3-205ENST00000531504 SDIM1Q6ZPB5 146 aa12.63□□□□□ -0.39
HIPK3-205ENST00000531504 SDHAF1A6NFY7 115 aa12.62□□□□□ -0.39
HIPK3-205ENST00000531504 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
HIPK3-205ENST00000531504 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
HIPK3-205ENST00000531504 RPL32P62910 135 aaKnown RBP12.62□□□□□ -0.39
HIPK3-205ENST00000531504 CIRBPQ14011 172 aaKnown RBP12.62□□□□□ -0.39
HIPK3-205ENST00000531504 MIAQ16674 131 aa12.62□□□□□ -0.39
HIPK3-205ENST00000531504 LINC01600Q96MT4 127 aa12.62□□□□□ -0.39
HIPK3-205ENST00000531504 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
HIPK3-205ENST00000531504 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
HIPK3-205ENST00000531504 DPH3Q96FX2 82 aa12.61□□□□□ -0.39
HIPK3-205ENST00000531504 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
HIPK3-205ENST00000531504 VCYO14598 125 aa12.6□□□□□ -0.39
HIPK3-205ENST00000531504 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
HIPK3-205ENST00000531504 LOC389332A0A1B0GUA5 103 aa12.59□□□□□ -0.39
HIPK3-205ENST00000531504 PMCHP20382 165 aa12.59□□□□□ -0.39
HIPK3-205ENST00000531504 PKIAP61925 76 aa12.59□□□□□ -0.39
HIPK3-205ENST00000531504 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
HIPK3-205ENST00000531504 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
HIPK3-205ENST00000531504 I3L3M4 83 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
HIPK3-205ENST00000531504 Q8N8P6 123 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
HIPK3-205ENST00000531504 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
HIPK3-205ENST00000531504 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
HIPK3-205ENST00000531504 RAB5BP61020 215 aa12.57□□□□□ -0.4
HIPK3-205ENST00000531504 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
HIPK3-205ENST00000531504 A0A087WYN8 130 aa12.56□□□□□ -0.4
HIPK3-205ENST00000531504 IFI27P40305 119 aaPredicted RBP12.56□□□□□ -0.4
HIPK3-205ENST00000531504 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
HIPK3-205ENST00000531504 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
HIPK3-205ENST00000531504 IGHV3-64A0A075B6Q5 118 aa12.55□□□□□ -0.4
HIPK3-205ENST00000531504 COTL1Q14019 142 aa12.55□□□□□ -0.4
HIPK3-205ENST00000531504 TMEM97Q5BJF2 176 aa12.55□□□□□ -0.4
HIPK3-205ENST00000531504 TCAPO15273 167 aa12.54□□□□□ -0.4
HIPK3-205ENST00000531504 TSHBP01222 138 aa12.54□□□□□ -0.4
HIPK3-205ENST00000531504 ODF1Q14990 250 aa12.54□□□□□ -0.4
HIPK3-205ENST00000531504 FA2HQ7L5A8 372 aa12.54□□□□□ -0.4
HIPK3-205ENST00000531504 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
HIPK3-205ENST00000531504 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.53□□□□□ -0.4
HIPK3-205ENST00000531504 A0A0J9YXV3 536 aa12.53□□□□□ -0.4
HIPK3-205ENST00000531504 K7EMI3 77 aa12.53□□□□□ -0.4
HIPK3-205ENST00000531504 FCER1GP30273 86 aa12.53□□□□□ -0.4
HIPK3-205ENST00000531504 SPACA4Q8TDM5 124 aa12.53□□□□□ -0.4
HIPK3-205ENST00000531504 CHCHD5Q9BSY4 110 aa12.53□□□□□ -0.4
HIPK3-205ENST00000531504 hDV102S1A0JD36 115 aa12.52□□□□□ -0.41
HIPK3-205ENST00000531504 LINC01546A6NGU7 62 aa12.52□□□□□ -0.41
HIPK3-205ENST00000531504 URB1-AS1Q96HZ7 61 aa12.52□□□□□ -0.41
HIPK3-205ENST00000531504 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
HIPK3-205ENST00000531504 LINC00614P0C842 121 aa12.51□□□□□ -0.41
HIPK3-205ENST00000531504 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
HIPK3-205ENST00000531504 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
HIPK3-205ENST00000531504 PRR34Q9NV39 138 aa12.51□□□□□ -0.41
HIPK3-205ENST00000531504 PLAC8Q9NZF1 115 aa12.51□□□□□ -0.41
HIPK3-205ENST00000531504 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
HIPK3-205ENST00000531504 CHTF8P0CG12 524 aa12.5□□□□□ -0.41
HIPK3-205ENST00000531504 AMTP48728 403 aa12.5□□□□□ -0.41
HIPK3-205ENST00000531504 ORMDL2Q53FV1 153 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms