RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 BAALCQ8WXS3 180 aa3.82□□□□□ -1.8
VPS11-204ENST00000530809 C16orf74Q96GX8 76 aa3.82□□□□□ -1.8
VPS11-204ENST00000530809 MRPL35Q9NZE8 188 aaKnown RBP3.82□□□□□ -1.8
VPS11-204ENST00000530809 DKK2Q9UBU2 259 aa3.82□□□□□ -1.8
VPS11-204ENST00000530809 HHLA3Q9XRX5 114 aa3.82□□□□□ -1.8
VPS11-204ENST00000530809 CHTOPQ9Y3Y2 248 aaKnown RBP3.82□□□□□ -1.8
VPS11-204ENST00000530809 PYGO1Q9Y3Y4 419 aa3.82□□□□□ -1.8
VPS11-204ENST00000530809 DNAH10Q8IVF4 4471 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 TEX48A0A1B0GUV7 120 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 IGIPA6NJ69 53 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 E9PLD3 99 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 RS1O15537 224 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 NMUP48645 174 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
VPS11-204ENST00000530809 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 UFSP1Q6NVU6 142 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 LINC01587Q99440 93 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 TMEM208Q9BTX3 173 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 SPANXA1Q9NS26 97 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 COX11Q9Y6N1 276 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 X6R8D5 127 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 PKHD1P08F94 4074 aa3.81□□□□□ -1.8
VPS11-204ENST00000530809 TRAV4A0A0B4J268 109 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 C11orf86A6NJI1 115 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 TSHBP01222 138 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 FXYD7P58549 80 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 DAZ2Q13117 558 aaKnown RBP3.8□□□□□ -1.8
VPS11-204ENST00000530809 C12orf74Q32Q52 190 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 CFAP126Q5VTH2 177 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 NFE4Q86UQ8 179 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 STPG4Q8N801 248 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 RNASE8Q8TDE3 154 aaKnown RBP3.8□□□□□ -1.8
VPS11-204ENST00000530809 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 CDIP1Q9H305 208 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 CELA1Q9UNI1 258 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 TNFRSF18Q9Y5U5 241 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
VPS11-204ENST00000530809 TRBV25-1A0A075B6N4 114 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 EPM2AB3EWF7 344 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 H3BRM9 83 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 SPART-AS1P0CW21 52 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 ZNF25P17030 456 aaPredicted RBP3.79□□□□□ -1.8
VPS11-204ENST00000530809 COTL1Q14019 142 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 DAZ4Q86SG3 579 aaKnown RBP3.79□□□□□ -1.8
VPS11-204ENST00000530809 C6orf223Q8N319 242 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 CHAC1Q9BUX1 264 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 JPT2Q9H910 190 aa3.79□□□□□ -1.8
VPS11-204ENST00000530809 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
VPS11-204ENST00000530809 IGLV4-69A0A075B6H9 119 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 MYMXA0A1B0GTQ4 84 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 SMIM9A6NGZ8 99 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 GIG44P09565 113 aaPredicted RBP3.78□□□□□ -1.8
VPS11-204ENST00000530809 INAFM2P0DMQ5 153 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 HTN1P15515 57 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 AZU1P20160 251 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 MRPS36P82909 103 aaKnown RBP3.78□□□□□ -1.8
VPS11-204ENST00000530809 RPL36AP83881 106 aaKnown RBP3.78□□□□□ -1.8
VPS11-204ENST00000530809 RRN3P1Q2M238 152 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 PCP2Q8IVA1 136 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 C15orf53Q8NAA6 179 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 CSNK1G2-AS1Q8NCQ2 148 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 OR4C5Q8NGB2 326 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 RPL36ALQ969Q0 106 aaKnown RBP3.78□□□□□ -1.8
VPS11-204ENST00000530809 TM2D2Q9BX73 214 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 VCX2Q9H322 139 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 XCL2Q9UBD3 114 aa3.78□□□□□ -1.8
VPS11-204ENST00000530809 CSDC2Q9Y534 153 aaKnown RBP3.78□□□□□ -1.8
VPS11-204ENST00000530809 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 TRBV7-3A0A075B6L6 115 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 IGKV2D-26A0A0A0MRZ7 120 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 TRBV6-4A0A1B0GX49 114 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 H7C423 109 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 ZNF561-AS1K7EIQ3 104 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 K7EQD1 137 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 TAX1BP3O14907 124 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 UBE2V1Q13404 147 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 CEND1Q8N111 149 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 PLEKHB2Q96CS7 222 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 AMELXQ99217 191 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 PRADC1Q9BSG0 188 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 GTSF1LQ9H1H1 148 aa3.77□□□□□ -1.81
VPS11-204ENST00000530809 SPANXB1Q9NS25 103 aaPredicted RBP3.77□□□□□ -1.81
VPS11-204ENST00000530809 DMBT1Q9UGM3 2413 aaPredicted RBP3.77□□□□□ -1.81
VPS11-204ENST00000530809 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 TRAV8-6A0A0B4J262 113 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 NBDYA0A0U1RRE5 68 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 TINCRA0A1B0GVN0 87 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 C9orf118A6NHY6 69 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 ZNF815PA8K554 130 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 LEPROTO15243 131 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 GCSHP23434 173 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 RPL39P62891 51 aaKnown RBP3.76□□□□□ -1.81
VPS11-204ENST00000530809 LYRM7Q5U5X0 104 aa3.76□□□□□ -1.81
VPS11-204ENST00000530809 SCGB1D4Q6XE38 83 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms