RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PRSS3P2Q8NHM4 247 aa14.18□□□□□ -0.14
CAPN1-220ENST00000530567 FAM104AQ969W3 186 aa14.18□□□□□ -0.14
CAPN1-220ENST00000530567 TMEM101Q96IK0 257 aa14.18□□□□□ -0.14
CAPN1-220ENST00000530567 TRGC2P03986 189 aa14.17□□□□□ -0.14
CAPN1-220ENST00000530567 KRTAP26-1Q6PEX3 210 aa14.17□□□□□ -0.14
CAPN1-220ENST00000530567 RMI2Q96E14 147 aa14.17□□□□□ -0.14
CAPN1-220ENST00000530567 URB1-AS1Q96HZ7 61 aa14.17□□□□□ -0.14
CAPN1-220ENST00000530567 TM2D2Q9BX73 214 aa14.17□□□□□ -0.14
CAPN1-220ENST00000530567 DNAH11Q96DT5 4516 aa14.17□□□□□ -0.14
CAPN1-220ENST00000530567 Q6ZUT4 128 aa14.16□□□□□ -0.14
CAPN1-220ENST00000530567 SPANXA1Q9NS26 97 aa14.16□□□□□ -0.14
CAPN1-220ENST00000530567 PKD1P98161 4303 aa14.16□□□□□ -0.14
CAPN1-220ENST00000530567 HECTD4Q9Y4D8 3996 aa14.16□□□□□ -0.14
CAPN1-220ENST00000530567 ZNF664Q8N3J9 261 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 C1orf43Q9BWL3 253 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 LRCOL1A6NCL2 159 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 PSCAO43653 123 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 SMAGPQ0VAQ4 97 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 DGAT2L7PQ6IED9 249 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 C2orf66Q6UXQ4 117 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 COX11Q9Y6N1 276 aa14.15□□□□□ -0.14
CAPN1-220ENST00000530567 IGLV10-54A0A075B6I4 117 aa14.14□□□□□ -0.15
CAPN1-220ENST00000530567 A0A087WTM6 91 aa14.14□□□□□ -0.15
CAPN1-220ENST00000530567 RNASE13Q5GAN3 156 aaKnown RBP14.14□□□□□ -0.15
CAPN1-220ENST00000530567 FA2HQ7L5A8 372 aa14.14□□□□□ -0.15
CAPN1-220ENST00000530567 CYSLTR1Q9Y271 337 aa14.14□□□□□ -0.15
CAPN1-220ENST00000530567 TRAV8-4A0A0B4J246 113 aa14.13□□□□□ -0.15
CAPN1-220ENST00000530567 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
CAPN1-220ENST00000530567 WFDC2Q14508 124 aa14.13□□□□□ -0.15
CAPN1-220ENST00000530567 OPRPNQ99935 248 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-220ENST00000530567 PYGO1Q9Y3Y4 419 aa14.13□□□□□ -0.15
CAPN1-220ENST00000530567 MRPS36P82909 103 aaKnown RBP14.12□□□□□ -0.15
CAPN1-220ENST00000530567 EPPK1P58107 5090 aaKnown RBP14.12□□□□□ -0.15
CAPN1-220ENST00000530567 TOMM6Q96B49 74 aa14.1□□□□□ -0.15
CAPN1-220ENST00000530567 AP5S1Q9NUS5 200 aa14.1□□□□□ -0.15
CAPN1-220ENST00000530567 IGLV4-3A0A075B6K6 122 aa14.09□□□□□ -0.15
CAPN1-220ENST00000530567 LINC00959A0A1B0GUT2 108 aa14.09□□□□□ -0.15
CAPN1-220ENST00000530567 IGIPA6NJ69 53 aa14.09□□□□□ -0.15
CAPN1-220ENST00000530567 LINC00614P0C842 121 aa14.09□□□□□ -0.15
CAPN1-220ENST00000530567 A0A096LNJ9 63 aa14.08□□□□□ -0.15
CAPN1-220ENST00000530567 BAALCQ8WXS3 180 aa14.08□□□□□ -0.15
CAPN1-220ENST00000530567 G0S2P27469 103 aa14.07□□□□□ -0.16
CAPN1-220ENST00000530567 CHCHD10Q8WYQ3 142 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-220ENST00000530567 PKHD1P08F94 4074 aa14.07□□□□□ -0.16
CAPN1-220ENST00000530567 LECT2O14960 151 aa14.07□□□□□ -0.16
CAPN1-220ENST00000530567 RAB5BP61020 215 aa14.06□□□□□ -0.16
CAPN1-220ENST00000530567 GAGE12HA6NDE8 117 aa14.05□□□□□ -0.16
CAPN1-220ENST00000530567 NPSP0C0P6 89 aa14.05□□□□□ -0.16
CAPN1-220ENST00000530567 KRTAP10-2P60368 255 aa14.05□□□□□ -0.16
CAPN1-220ENST00000530567 LINC00173Q6ZV60 143 aa14.05□□□□□ -0.16
CAPN1-220ENST00000530567 TMEM141Q96I45 108 aa14.05□□□□□ -0.16
CAPN1-220ENST00000530567 TIMM17AQ99595 171 aa14.05□□□□□ -0.16
CAPN1-220ENST00000530567 TRAV13-1A0A0B4J241 112 aa14.04□□□□□ -0.16
CAPN1-220ENST00000530567 CCL25O15444 150 aa14.04□□□□□ -0.16
CAPN1-220ENST00000530567 FOXI1Q12951 378 aa14.04□□□□□ -0.16
CAPN1-220ENST00000530567 Q8N814 137 aa14.04□□□□□ -0.16
CAPN1-220ENST00000530567 XCL1P47992 114 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 LINC00310P59036 64 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 SS18Q15532 418 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 PMCHL1Q16048 86 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 ZC2HC1BQ5TFG8 222 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 ERASQ7Z444 233 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 SPATA12Q7Z6I5 190 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 CHCHD1Q96BP2 118 aaKnown RBP14.03□□□□□ -0.16
CAPN1-220ENST00000530567 AMELXQ99217 191 aa14.03□□□□□ -0.16
CAPN1-220ENST00000530567 IFITM10A6NMD0 228 aa14.02□□□□□ -0.16
CAPN1-220ENST00000530567 EREGO14944 169 aa14.02□□□□□ -0.16
CAPN1-220ENST00000530567 SCGB3A1Q96QR1 104 aa14.02□□□□□ -0.16
CAPN1-220ENST00000530567 LINC01549A6NIU2 74 aa14.01□□□□□ -0.17
CAPN1-220ENST00000530567 C1orf196B1AJZ1 125 aa14.01□□□□□ -0.17
CAPN1-220ENST00000530567 USP17L23D6RBM5 183 aa14.01□□□□□ -0.17
CAPN1-220ENST00000530567 FUSP35637 526 aaKnown RBP eCLIP14.01□□□□□ -0.17
CAPN1-220ENST00000530567 BAGE3Q86Y29 109 aa14.01□□□□□ -0.17
CAPN1-220ENST00000530567 HBDP02042 147 aa14□□□□□ -0.17
CAPN1-220ENST00000530567 CD164L2Q6UWJ8 174 aa14□□□□□ -0.17
CAPN1-220ENST00000530567 TEX43Q6ZNM6 134 aa14□□□□□ -0.17
CAPN1-220ENST00000530567 PDZD11Q5EBL8 140 aa13.99□□□□□ -0.17
CAPN1-220ENST00000530567 Q6ZN92 141 aa13.99□□□□□ -0.17
CAPN1-220ENST00000530567 DYNC1H1Q14204 4646 aaKnown RBP13.99□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BKO60814 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BJP06899 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BOP23527 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BBP33778 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BDP58876 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BCP62807 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST2H2BEQ16778 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BHQ93079 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BNQ99877 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 HIST1H2BMQ99879 126 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 VCX2Q9H322 139 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 DNAH5Q8TE73 4624 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 SERF1AO75920 110 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 UBE2D1P51668 147 aa13.98□□□□□ -0.17
CAPN1-220ENST00000530567 PAPPA-AS1Q5QFB9 102 aa13.97□□□□□ -0.17
CAPN1-220ENST00000530567 C15orf56Q8N910 161 aa13.97□□□□□ -0.17
CAPN1-220ENST00000530567 LINC00242Q5T6M2 205 aa13.96□□□□□ -0.18
CAPN1-220ENST00000530567 C2orf88Q9BSF0 95 aa13.96□□□□□ -0.18
CAPN1-220ENST00000530567 NUPR1O60356 82 aa13.95□□□□□ -0.18
CAPN1-220ENST00000530567 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms