RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 RBMY1CP0DJD4 496 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 CD28P10747 220 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 RBMY1FQ15415 496 aaKnown RBP8.48□□□□□ -1.05
USP35-207ENST00000530546 Q1RN00 199 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 CUBNO60494 3623 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
USP35-207ENST00000530546 KRTAP1-1Q07627 177 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 ZNF56Q15929 161 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 C2orf82Q6UX34 121 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
USP35-207ENST00000530546 RBMY1BA6NDE4 496 aaKnown RBP8.46□□□□□ -1.05
USP35-207ENST00000530546 RBMY1EA6NEQ0 496 aaKnown RBP8.46□□□□□ -1.05
USP35-207ENST00000530546 IGIPA6NJ69 53 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 RBMY1DP0C7P1 496 aaKnown RBP8.46□□□□□ -1.05
USP35-207ENST00000530546 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 TIMM17AQ99595 171 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 NOTCH2Q04721 2471 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 UNC79Q9P2D8 2635 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 TSHBP01222 138 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 ZNF876PQ49A33 203 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 IGHV3-73A0A0B4J1V6 119 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 H7C2G1 150 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 SMR3AQ99954 134 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
USP35-207ENST00000530546 HECTD1Q9ULT8 2610 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 LEPROTO15243 131 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 NDUFA7O95182 113 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 TP53TG1Q9Y2A0 90 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 H7C423 109 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 TRIAP1O43715 76 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 ATP5G1P05496 136 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 ACYP1P07311 99 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 A0A1B0GX51 115 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 CCL24O00175 119 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 LINC00694P0DN24 101 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 TRGV11A0A075B6L2 103 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 UQCRQO14949 82 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 COX6CP09669 75 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 C9orf153Q5TBE3 101 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 POM121L12Q8N7R1 296 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 J3KT08 172 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 EMP1P54849 157 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 FAM236AA0A1B0GUQ0 79 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 FAM236BA0A1B0GV22 79 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 LINC01006Q8NI28 216 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
USP35-207ENST00000530546 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
USP35-207ENST00000530546 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
USP35-207ENST00000530546 ICOSQ9Y6W8 199 aa8.42□□□□□ -1.06
USP35-207ENST00000530546 IGHV3OR16-12A0A075B7B8 117 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 VCYO14598 125 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
USP35-207ENST00000530546 SMIM9A6NGZ8 99 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 M0QY20 66 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 PROK1P58294 105 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 C3orf56Q8N813 242 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 ANK3Q12955 4377 aaKnown RBP8.4□□□□□ -1.06
USP35-207ENST00000530546 F8WDY8 70 aa8.4□□□□□ -1.06
USP35-207ENST00000530546 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
USP35-207ENST00000530546 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.06
USP35-207ENST00000530546 HIVEP2P31629 2446 aa8.4□□□□□ -1.07
USP35-207ENST00000530546 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.07
USP35-207ENST00000530546 HERVK_113P63121 156 aa8.4□□□□□ -1.07
USP35-207ENST00000530546 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.07
USP35-207ENST00000530546 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
USP35-207ENST00000530546 LST1O00453 97 aa8.39□□□□□ -1.07
USP35-207ENST00000530546 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
USP35-207ENST00000530546 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
USP35-207ENST00000530546 STHQ8IWL8 128 aa8.38□□□□□ -1.07
USP35-207ENST00000530546 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
USP35-207ENST00000530546 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 A8MTW9 85 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 INSP01308 110 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 CXCL5P42830 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
USP35-207ENST00000530546 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
USP35-207ENST00000530546 OR13C6PQ8NH95 151 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 Q9UF83 564 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
USP35-207ENST00000530546 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
USP35-207ENST00000530546 WFDC10AQ9H1F0 79 aa8.36□□□□□ -1.07
USP35-207ENST00000530546 Q6ZSN1 163 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 CRYGAP11844 174 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 COX7CP15954 63 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
USP35-207ENST00000530546 LITAFQ99732 161 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 C16orf95Q9H693 158 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms