RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 CCL20P78556 96 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 ANKRD39Q53RE8 183 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 Q5BKY6 102 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 LYZL1Q6UWQ5 148 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 MRAP2Q96G30 205 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 CYTL1Q9NRR1 136 aa4.57□□□□□ -1.68
NUP98-217ENST00000530345 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 I3L3M4 83 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 RNF151Q2KHN1 245 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 Q6ZNX1 250 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 MRPL52Q86TS9 123 aaKnown RBP4.56□□□□□ -1.68
NUP98-217ENST00000530345 GATD1Q8NB37 220 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
NUP98-217ENST00000530345 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
NUP98-217ENST00000530345 TRBV6-5A0A0K0K1A5 114 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 IGKV2-29A2NJV5 120 aaPredicted RBP4.55□□□□□ -1.68
NUP98-217ENST00000530345 C1orf196B1AJZ1 125 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 H0Y9J4 135 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 COX7A2LO14548 114 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 ESDP10768 282 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 MALP21145 153 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 TAGLN2P37802 199 aaKnown RBP4.55□□□□□ -1.68
NUP98-217ENST00000530345 MEF2BQ02080 365 aaPredicted RBP4.55□□□□□ -1.68
NUP98-217ENST00000530345 GAGE2BQ13066 116 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 TWIST1Q15672 202 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 C1orf137Q5JT78 98 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 NUP35Q8NFH5 326 aa4.55□□□□□ -1.68
NUP98-217ENST00000530345 KANTRA0A1W2PQU2 76 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 G3V3Q6 166 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 IGLV7-43P04211 117 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 PMCHP20382 165 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
NUP98-217ENST00000530345 CAMK2N2Q96S95 79 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 RPP21Q9H633 154 aaKnown RBP4.54□□□□□ -1.68
NUP98-217ENST00000530345 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 GNG13Q9P2W3 67 aa4.54□□□□□ -1.68
NUP98-217ENST00000530345 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
NUP98-217ENST00000530345 A0A1B0GV50 99 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 C7orf77A4D0Y5 90 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 HMSDA8MTL9 139 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 BCL2L11O43521 198 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 PPP1R17O96001 155 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 UBE2D1P51668 147 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 OR10D4PQ8NGN7 298 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
NUP98-217ENST00000530345 IMMP2LQ96T52 175 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 ST20Q9HBF5 79 aa4.53□□□□□ -1.68
NUP98-217ENST00000530345 TRBV20OR9-2A0A075B6H5 130 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 TRBV27A0A0K0K1C4 114 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
NUP98-217ENST00000530345 BCL2P10415 239 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 RPL18AQ02543 176 aaKnown RBP4.52□□□□□ -1.69
NUP98-217ENST00000530345 PRR26Q8N8Z3 221 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 NUDT10Q8NFP7 164 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 BORCS7Q96B45 105 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 LINC00526Q96FQ7 95 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 NUDT11Q96G61 164 aa4.52□□□□□ -1.69
NUP98-217ENST00000530345 MRPL35Q9NZE8 188 aaKnown RBP4.52□□□□□ -1.69
NUP98-217ENST00000530345 CARHSP1Q9Y2V2 147 aaKnown RBP4.52□□□□□ -1.69
NUP98-217ENST00000530345 A8MWL6 223 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 TCAPO15273 167 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 TSHBP01222 138 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 CT83Q5H943 113 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 TMEM18Q96B42 140 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 TIMM21Q9BVV7 248 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 MED9Q9NWA0 146 aa4.51□□□□□ -1.69
NUP98-217ENST00000530345 hCG_2014768A0A024R1R8 64 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 RAB19A4D1S5 217 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 PPP1R2P9O14990 202 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 NDUFA1O15239 70 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 POLR2KP53803 58 aaKnown RBP4.5□□□□□ -1.69
NUP98-217ENST00000530345 SPAG11BQ08648 103 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 PRR4Q16378 134 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 TMEM241Q24JQ0 296 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 TMEM242Q9NWH2 141 aa4.5□□□□□ -1.69
NUP98-217ENST00000530345 A0A087WZ39 114 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 KRTAP1-4P0C5Y4 121 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 FCER1GP30273 86 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 FOXA3P55318 350 aaPredicted RBP4.49□□□□□ -1.69
NUP98-217ENST00000530345 FAM231DQ6ZW35 169 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 PHF5AQ7RTV0 110 aaKnown RBP4.49□□□□□ -1.69
NUP98-217ENST00000530345 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 TMEM191AQ9H0A3 160 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 BATF3Q9NR55 127 aa4.49□□□□□ -1.69
NUP98-217ENST00000530345 TMEM250H0YL14 139 aa4.48□□□□□ -1.69
NUP98-217ENST00000530345 VCYO14598 125 aa4.48□□□□□ -1.69
NUP98-217ENST00000530345 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
NUP98-217ENST00000530345 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
NUP98-217ENST00000530345 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
NUP98-217ENST00000530345 TRBV30A0A0K0K1B3 111 aa4.47□□□□□ -1.69
NUP98-217ENST00000530345 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
NUP98-217ENST00000530345 GATCO43716 136 aaKnown RBP4.47□□□□□ -1.69
NUP98-217ENST00000530345 UBE2BP63146 152 aa4.47□□□□□ -1.69
NUP98-217ENST00000530345 C21orf62-AS1Q17RA5 79 aa4.47□□□□□ -1.69
NUP98-217ENST00000530345 RGS21Q2M5E4 152 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms