RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 AP3S2P59780 193 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 SS18Q15532 418 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 COX19Q49B96 90 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 PHF5AQ7RTV0 110 aaKnown RBP3.64□□□□□ -1.83
SVIP-204ENST00000530199 EXOC3-AS1Q8N2X6 119 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 TERB2Q8NHR7 220 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 ASB13Q8WXK3 278 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 CIB3Q96Q77 187 aaPredicted RBP3.64□□□□□ -1.83
SVIP-204ENST00000530199 NAA60Q9H7X0 242 aa3.64□□□□□ -1.83
SVIP-204ENST00000530199 PAIP2BQ9ULR5 123 aaKnown RBP3.64□□□□□ -1.83
SVIP-204ENST00000530199 TRBV7-3A0A075B6L6 115 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 C7orf66A4D0T2 115 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 FNDC10F2Z333 226 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 IAPPP10997 89 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
SVIP-204ENST00000530199 C10orf113Q5VZT2 155 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 C8orf59Q8N0T1 100 aaPredicted RBP3.63□□□□□ -1.83
SVIP-204ENST00000530199 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 RAB2BQ8WUD1 216 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 S100A16Q96FQ6 103 aaKnown RBP3.63□□□□□ -1.83
SVIP-204ENST00000530199 NPVFQ9HCQ7 196 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 CYTL1Q9NRR1 136 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 NDUFB11Q9NX14 153 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 TMEM14CQ9P0S9 112 aa3.63□□□□□ -1.83
SVIP-204ENST00000530199 MOBPQ13875 183 aa3.62□□□□□ -1.83
SVIP-204ENST00000530199 IZUMO2Q6UXV1 221 aa3.62□□□□□ -1.83
SVIP-204ENST00000530199 COMMD3Q9UBI1 195 aa3.62□□□□□ -1.83
SVIP-204ENST00000530199 TIMM9Q9Y5J7 89 aa3.62□□□□□ -1.83
SVIP-204ENST00000530199 A0A1B0GVG6 124 aa3.61□□□□□ -1.83
SVIP-204ENST00000530199 NDUFS5O43920 106 aa3.61□□□□□ -1.83
SVIP-204ENST00000530199 RNASE3P12724 160 aaKnown RBP3.61□□□□□ -1.83
SVIP-204ENST00000530199 NKX2-5P52952 324 aaPredicted RBP3.61□□□□□ -1.83
SVIP-204ENST00000530199 SLC38A11Q08AI6 406 aa3.61□□□□□ -1.83
SVIP-204ENST00000530199 TMEM97Q5BJF2 176 aa3.61□□□□□ -1.83
SVIP-204ENST00000530199 MRPL52Q86TS9 123 aaKnown RBP3.61□□□□□ -1.83
SVIP-204ENST00000530199 CARD19Q96LW7 228 aa3.61□□□□□ -1.83
SVIP-204ENST00000530199 RTBDNQ9BSG5 229 aaPredicted RBP3.61□□□□□ -1.83
SVIP-204ENST00000530199 LOC107984640A0A0U1RRK4 108 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 COLCA2A8K830 154 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 FGF6P10767 208 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 PSMB2P49721 201 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 RAB5CP51148 216 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 RAB14P61106 215 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 RNASE10Q5GAN6 216 aaKnown RBP3.6□□□□□ -1.83
SVIP-204ENST00000530199 SPANXN5Q5MJ07 72 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SVIP-204ENST00000530199 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 C12orf45Q8N5I9 185 aaPredicted RBP3.6□□□□□ -1.83
SVIP-204ENST00000530199 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 TXNL4BQ9NX01 149 aaKnown RBP3.6□□□□□ -1.83
SVIP-204ENST00000530199 SCN3BQ9NY72 215 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 PRO0461Q9UI25 63 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 KMT2DO14686 5537 aa3.6□□□□□ -1.83
SVIP-204ENST00000530199 SYNGR2O43760 224 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 SCO1O75880 301 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 SLC25A6P12236 298 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 S100A10P60903 97 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 LGALSLQ3ZCW2 172 aaPredicted RBP3.59□□□□□ -1.83
SVIP-204ENST00000530199 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 LYZL2Q7Z4W2 148 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 AKAP14Q86UN6 197 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 DIRAS2Q96HU8 199 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 C14orf166Q9Y224 244 aaKnown RBP3.59□□□□□ -1.83
SVIP-204ENST00000530199 PHLDA3Q9Y5J5 127 aa3.59□□□□□ -1.83
SVIP-204ENST00000530199 M0R036 132 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 SDC2P34741 201 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 UBE2NLQ5JXB2 153 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 EIF5AL1Q6IS14 154 aaKnown RBP3.58□□□□□ -1.84
SVIP-204ENST00000530199 ORMDL3Q8N138 153 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.58□□□□□ -1.84
SVIP-204ENST00000530199 DYNC2LI1Q8TCX1 351 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 PFDN5Q99471 154 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
SVIP-204ENST00000530199 PIGBOS1A0A0B4J2F0 54 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 H3BP45 60 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 HPGDSO60760 199 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 PYYP10082 97 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 CSN1S1P47710 185 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 GNGT1P63211 74 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 PMVKQ15126 192 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 IQCJQ1A5X6 159 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 PDZD11Q5EBL8 140 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 PACRGLQ8N7B6 248 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 MGST2Q99735 147 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 MARVELD1Q9BSK0 173 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 TPRKBQ9Y3C4 175 aa3.57□□□□□ -1.84
SVIP-204ENST00000530199 TRBV25-1A0A075B6N4 114 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 DUXBA0A1W2PPF3 345 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 F6UZH7 168 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 TCAPO15273 167 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 CD3DP04234 171 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 NBEAP1P0C6P0 100 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 RRAS2P62070 204 aaPredicted RBP3.56□□□□□ -1.84
SVIP-204ENST00000530199 SCGB2B2Q4G0G5 96 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 TVP23CQ96ET8 276 aa3.56□□□□□ -1.84
SVIP-204ENST00000530199 PACRGQ96M98 296 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms