RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
CAPRIN1-207ENST00000529307 C3orf22Q8N5N4 141 aa12.22□□□□□ -0.45
CAPRIN1-207ENST00000529307 SCGB3A1Q96QR1 104 aa12.22□□□□□ -0.45
CAPRIN1-207ENST00000529307 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
CAPRIN1-207ENST00000529307 TRBV10-2A0A0K0K1G8 114 aa12.21□□□□□ -0.46
CAPRIN1-207ENST00000529307 PHLDA3Q9Y5J5 127 aa12.21□□□□□ -0.46
CAPRIN1-207ENST00000529307 MUC4Q99102 2169 aa12.21□□□□□ -0.46
CAPRIN1-207ENST00000529307 VWFP04275 2813 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 RPS28P62857 69 aaKnown RBP12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 ZNF56Q15929 161 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 IMUPQ9GZP8 106 aa12.2□□□□□ -0.46
CAPRIN1-207ENST00000529307 BAHCC1Q9P281 2608 aa12.19□□□□□ -0.46
CAPRIN1-207ENST00000529307 IGLV1-51P01701 117 aa12.19□□□□□ -0.46
CAPRIN1-207ENST00000529307 HERVK_113P63121 156 aa12.19□□□□□ -0.46
CAPRIN1-207ENST00000529307 ORMDL2Q53FV1 153 aa12.19□□□□□ -0.46
CAPRIN1-207ENST00000529307 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
CAPRIN1-207ENST00000529307 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
CAPRIN1-207ENST00000529307 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
CAPRIN1-207ENST00000529307 CYSRT1A8MQ03 144 aa12.18□□□□□ -0.46
CAPRIN1-207ENST00000529307 UQCRQO14949 82 aa12.18□□□□□ -0.46
CAPRIN1-207ENST00000529307 NXPH4O95158 308 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 HERVK_113P61574 105 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 LINC00526Q96FQ7 95 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 POM121L12Q8N7R1 296 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
CAPRIN1-207ENST00000529307 ATRQ13535 2644 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 PRM2P04554 102 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 C14orf178Q8N769 122 aaPredicted RBP12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 SMIM2Q9BVW6 85 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 A0A0B4J2C4 111 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 EMP1P54849 157 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 JPT2Q9H910 190 aa12.16□□□□□ -0.46
CAPRIN1-207ENST00000529307 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
CAPRIN1-207ENST00000529307 A4D1N5 150 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 PF4P02776 101 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 WFDC10AQ9H1F0 79 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 TRRAPQ9Y4A5 3859 aa12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 TEP1Q99973 2627 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-207ENST00000529307 PMVKQ15126 192 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 C19orf73Q9NVV2 129 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 H3BT86 120 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 ATP5G1P05496 136 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 LINC00315P59091 139 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 BEAN1Q3B7T3 259 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 TMEM170BQ5T4T1 132 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
CAPRIN1-207ENST00000529307 HTN1P15515 57 aa12.12□□□□□ -0.47
CAPRIN1-207ENST00000529307 STHQ8IWL8 128 aa12.12□□□□□ -0.47
CAPRIN1-207ENST00000529307 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
CAPRIN1-207ENST00000529307 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-207ENST00000529307 NOTCH3Q9UM47 2321 aa12.11□□□□□ -0.47
CAPRIN1-207ENST00000529307 XCL2Q9UBD3 114 aa12.11□□□□□ -0.47
CAPRIN1-207ENST00000529307 MGPP08493 103 aa12.1□□□□□ -0.47
CAPRIN1-207ENST00000529307 C2orf66Q6UXQ4 117 aa12.1□□□□□ -0.47
CAPRIN1-207ENST00000529307 A0A087WWL8 130 aa12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 H7C2G1 150 aa12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 Q1RN00 199 aa12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 H7C423 109 aa12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 RPL39LQ96EH5 51 aaKnown RBP12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
CAPRIN1-207ENST00000529307 INSP01308 110 aa12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 ACYP1P07311 99 aa12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 SUMO2P61956 95 aaKnown RBP12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 CEMP1Q6PRD7 247 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 AMELXQ99217 191 aa12.08□□□□□ -0.48
CAPRIN1-207ENST00000529307 CRYGDP07320 174 aa12.07□□□□□ -0.48
CAPRIN1-207ENST00000529307 GIG44P09565 113 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-207ENST00000529307 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
CAPRIN1-207ENST00000529307 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
CAPRIN1-207ENST00000529307 ZNF876PQ49A33 203 aa12.07□□□□□ -0.48
CAPRIN1-207ENST00000529307 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
CAPRIN1-207ENST00000529307 CRYGAP11844 174 aa12.06□□□□□ -0.48
CAPRIN1-207ENST00000529307 COX7CP15954 63 aa12.06□□□□□ -0.48
CAPRIN1-207ENST00000529307 CMC4P56277 68 aaPredicted RBP12.06□□□□□ -0.48
CAPRIN1-207ENST00000529307 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
CAPRIN1-207ENST00000529307 TRIAP1O43715 76 aa12.06□□□□□ -0.48
CAPRIN1-207ENST00000529307 C11orf72Q8NBR9 251 aa12.06□□□□□ -0.48
CAPRIN1-207ENST00000529307 J3QQQ9 107 aa12.04□□□□□ -0.48
CAPRIN1-207ENST00000529307 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
CAPRIN1-207ENST00000529307 SUMO4Q6EEV6 95 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 290.5 ms