RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 H7C423 109 aa13.33□□□□□ -0.28
LTBP3-210ENST00000528516 DSCR9P59020 149 aa13.33□□□□□ -0.28
LTBP3-210ENST00000528516 ZNF580Q9UK33 172 aa13.33□□□□□ -0.28
LTBP3-210ENST00000528516 ASH1LQ9NR48 2969 aaKnown RBP13.32□□□□□ -0.28
LTBP3-210ENST00000528516 LOC107984640A0A0U1RRK4 108 aa13.32□□□□□ -0.28
LTBP3-210ENST00000528516 IGIPA6NJ69 53 aa13.32□□□□□ -0.28
LTBP3-210ENST00000528516 A8MZ25 164 aa13.32□□□□□ -0.28
LTBP3-210ENST00000528516 DEFB4AO15263 64 aa13.32□□□□□ -0.28
LTBP3-210ENST00000528516 C5orf38Q86SI9 138 aa13.32□□□□□ -0.28
LTBP3-210ENST00000528516 FLNAP21333 2647 aaKnown RBP13.31□□□□□ -0.28
LTBP3-210ENST00000528516 ZFAND2AQ8N6M9 145 aa13.31□□□□□ -0.28
LTBP3-210ENST00000528516 TIMM17AQ99595 171 aa13.31□□□□□ -0.28
LTBP3-210ENST00000528516 A0A0J9YXY3 114 aa13.3□□□□□ -0.28
LTBP3-210ENST00000528516 H3BT86 120 aa13.3□□□□□ -0.28
LTBP3-210ENST00000528516 AVPP01185 164 aa13.3□□□□□ -0.28
LTBP3-210ENST00000528516 Q9H8V8 135 aa13.3□□□□□ -0.28
LTBP3-210ENST00000528516 KLK5Q9Y337 293 aaPredicted RBP13.3□□□□□ -0.28
LTBP3-210ENST00000528516 LENEPQ9Y5L5 61 aa13.29□□□□□ -0.28
LTBP3-210ENST00000528516 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
LTBP3-210ENST00000528516 TRBV30A0A0K0K1B3 111 aa13.29□□□□□ -0.28
LTBP3-210ENST00000528516 GPHB5Q86YW7 130 aa13.29□□□□□ -0.28
LTBP3-210ENST00000528516 TMEM223A0PJW6 202 aa13.28□□□□□ -0.28
LTBP3-210ENST00000528516 CRPP02741 224 aa13.28□□□□□ -0.28
LTBP3-210ENST00000528516 HERVK_113P63121 156 aa13.28□□□□□ -0.28
LTBP3-210ENST00000528516 C18orf65Q6ZTR6 163 aa13.28□□□□□ -0.28
LTBP3-210ENST00000528516 ITPR3Q14573 2671 aa13.27□□□□□ -0.28
LTBP3-210ENST00000528516 C11orf71Q6IPW1 123 aa13.27□□□□□ -0.28
LTBP3-210ENST00000528516 GAGE2AQ6NT46 116 aa13.27□□□□□ -0.28
LTBP3-210ENST00000528516 FLNCQ14315 2725 aa13.27□□□□□ -0.29
LTBP3-210ENST00000528516 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.29
LTBP3-210ENST00000528516 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
LTBP3-210ENST00000528516 IGHV3-30-3P0DP02 117 aa13.26□□□□□ -0.29
LTBP3-210ENST00000528516 CLPSL1A2RUU4 121 aa13.26□□□□□ -0.29
LTBP3-210ENST00000528516 XCL1P47992 114 aa13.26□□□□□ -0.29
LTBP3-210ENST00000528516 A0A0J9YX75 114 aa13.25□□□□□ -0.29
LTBP3-210ENST00000528516 NDUFA7O95182 113 aa13.25□□□□□ -0.29
LTBP3-210ENST00000528516 ITPR1Q14643 2758 aa13.25□□□□□ -0.29
LTBP3-210ENST00000528516 TEP1Q99973 2627 aaKnown RBP13.25□□□□□ -0.29
LTBP3-210ENST00000528516 RNASE3P12724 160 aaKnown RBP13.25□□□□□ -0.29
LTBP3-210ENST00000528516 A6NDX4 124 aa13.24□□□□□ -0.29
LTBP3-210ENST00000528516 CCL24O00175 119 aa13.24□□□□□ -0.29
LTBP3-210ENST00000528516 C3orf22Q8N5N4 141 aa13.24□□□□□ -0.29
LTBP3-210ENST00000528516 POLR2KP53803 58 aaKnown RBP13.23□□□□□ -0.29
LTBP3-210ENST00000528516 HIST1H4AP62805 103 aaKnown RBP13.23□□□□□ -0.29
LTBP3-210ENST00000528516 CSDC2Q9Y534 153 aaKnown RBP13.23□□□□□ -0.29
LTBP3-210ENST00000528516 J3KT08 172 aa13.23□□□□□ -0.29
LTBP3-210ENST00000528516 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
LTBP3-210ENST00000528516 AMELXQ99217 191 aa13.22□□□□□ -0.29
LTBP3-210ENST00000528516 DNAJC30Q96LL9 226 aa13.22□□□□□ -0.29
LTBP3-210ENST00000528516 EBI3Q14213 229 aa13.22□□□□□ -0.29
LTBP3-210ENST00000528516 S100A7L2Q5SY68 101 aa13.22□□□□□ -0.29
LTBP3-210ENST00000528516 Q8N6K4 173 aa13.22□□□□□ -0.29
LTBP3-210ENST00000528516 F5H768 121 aa13.21□□□□□ -0.29
LTBP3-210ENST00000528516 C5orf47Q569G3 176 aa13.21□□□□□ -0.29
LTBP3-210ENST00000528516 TINCRA0A1B0GVN0 87 aa13.21□□□□□ -0.3
LTBP3-210ENST00000528516 UQCRQO14949 82 aa13.21□□□□□ -0.3
LTBP3-210ENST00000528516 TMEM243Q9BU79 118 aa13.21□□□□□ -0.3
LTBP3-210ENST00000528516 LST1O00453 97 aa13.2□□□□□ -0.3
LTBP3-210ENST00000528516 TMEM86BQ8N661 226 aa13.2□□□□□ -0.3
LTBP3-210ENST00000528516 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
LTBP3-210ENST00000528516 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
LTBP3-210ENST00000528516 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
LTBP3-210ENST00000528516 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
LTBP3-210ENST00000528516 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
LTBP3-210ENST00000528516 ADAMTSL4-AS1Q5T5F5 129 aa13.19□□□□□ -0.3
LTBP3-210ENST00000528516 C20orf203Q8NBC4 194 aa13.19□□□□□ -0.3
LTBP3-210ENST00000528516 RHOHQ15669 191 aa13.18□□□□□ -0.3
LTBP3-210ENST00000528516 DPH3Q96FX2 82 aa13.18□□□□□ -0.3
LTBP3-210ENST00000528516 CITED2Q99967 270 aaPredicted RBP13.18□□□□□ -0.3
LTBP3-210ENST00000528516 FAM240AA0A1B0GVK7 77 aa13.18□□□□□ -0.3
LTBP3-210ENST00000528516 FAM19A5Q7Z5A7 132 aaPredicted RBP13.18□□□□□ -0.3
LTBP3-210ENST00000528516 WFDC10AQ9H1F0 79 aa13.18□□□□□ -0.3
LTBP3-210ENST00000528516 H3BUA1 57 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 Q6ZTI0 123 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 LINC00643Q86TS7 51 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 PRORYQ9H606 182 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 ACYP1P07311 99 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 WFDC11Q8NEX6 87 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 hADV29S1A0JD25 119 aa13.17□□□□□ -0.3
LTBP3-210ENST00000528516 TRBV7-7A0A0K0K1E9 115 aa13.16□□□□□ -0.3
LTBP3-210ENST00000528516 IGLV4-3A0A075B6K6 122 aa13.16□□□□□ -0.3
LTBP3-210ENST00000528516 SMIM9A6NGZ8 99 aa13.16□□□□□ -0.3
LTBP3-210ENST00000528516 MIAQ16674 131 aa13.16□□□□□ -0.3
LTBP3-210ENST00000528516 TRBV27A0A0K0K1C4 114 aa13.16□□□□□ -0.3
LTBP3-210ENST00000528516 ANGP03950 147 aaKnown RBP13.16□□□□□ -0.3
LTBP3-210ENST00000528516 CDKN2A-AS1Q9UH64 79 aa13.16□□□□□ -0.3
LTBP3-210ENST00000528516 BAALC-AS2P0C853 105 aa13.15□□□□□ -0.3
LTBP3-210ENST00000528516 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
LTBP3-210ENST00000528516 MED14OSP0DP75 135 aa13.15□□□□□ -0.3
LTBP3-210ENST00000528516 TRACP01848 142 aa13.14□□□□□ -0.31
LTBP3-210ENST00000528516 LAMTOR3Q9UHA4 124 aa13.14□□□□□ -0.31
LTBP3-210ENST00000528516 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
LTBP3-210ENST00000528516 DEFB113Q30KQ7 82 aa13.14□□□□□ -0.31
LTBP3-210ENST00000528516 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
LTBP3-210ENST00000528516 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
LTBP3-210ENST00000528516 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
LTBP3-210ENST00000528516 K7EQG2 157 aa13.13□□□□□ -0.31
LTBP3-210ENST00000528516 IGHV1-58A0A0C4DH39 117 aa13.13□□□□□ -0.31
LTBP3-210ENST00000528516 KRTAP10-9P60411 292 aa13.13□□□□□ -0.31
LTBP3-210ENST00000528516 IGKV3D-7A0A0C4DH55 119 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms