RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 UBALD1Q8TB05 177 aa3.29□□□□□ -1.88
PCF11-202ENST00000528336 COPS9Q8WXC6 57 aa3.29□□□□□ -1.88
PCF11-202ENST00000528336 LINC00526Q96FQ7 95 aa3.29□□□□□ -1.88
PCF11-202ENST00000528336 ITPR3Q14573 2671 aa3.29□□□□□ -1.88
PCF11-202ENST00000528336 ARFGEF3Q5TH69 2177 aa3.29□□□□□ -1.88
PCF11-202ENST00000528336 MALRD1Q5VYJ5 2156 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 M0R2P5 195 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 GEMIN2O14893 280 aaKnown RBP3.28□□□□□ -1.88
PCF11-202ENST00000528336 YPEL1O60688 119 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 ZNF737O75373 536 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 SPINK8P0C7L1 97 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 MOBPQ13875 183 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 ASB16-AS1Q495Z4 193 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 KHDC3LQ587J8 217 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 CLLU1Q5K131 121 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 C10orf105Q8TEF2 133 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 LINC00467Q9BRT7 94 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 SCRT1Q9BWW7 348 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 TMEM106BQ9NUM4 274 aa3.28□□□□□ -1.88
PCF11-202ENST00000528336 FLNAP21333 2647 aaKnown RBP3.28□□□□□ -1.88
PCF11-202ENST00000528336 AKAP9Q99996 3911 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 MTORP42345 2549 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 CELSR1Q9NYQ6 3014 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 HIVEP1P15822 2718 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 ACANP16112 2415 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 A0A087WXM4 84 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 C16orf90A8MZG2 172 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 LYNX1G3V0Z9 82 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 H3BSH0 61 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 SAA1P0DJI8 122 aaPredicted RBP3.27□□□□□ -1.89
PCF11-202ENST00000528336 LYNX1P0DP58 116 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 CRYGAP11844 174 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 SLC25A4P12235 298 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 IFITM1P13164 125 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 FABP4P15090 132 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 FXYD2P54710 66 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 BLCAPP62952 87 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 SPRNQ5BIV9 151 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 MRPL54Q6P161 138 aaKnown RBP3.27□□□□□ -1.89
PCF11-202ENST00000528336 AQP3Q92482 292 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 NDUFB11Q9NX14 153 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 NHP2Q9NX24 153 aaKnown RBP3.27□□□□□ -1.89
PCF11-202ENST00000528336 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
PCF11-202ENST00000528336 A0A096LNT2 108 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 A0A1B0GU33 70 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 PNMA8CA0A1B0GUJ8 204 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 A6NIN4 97 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 A6NN06 94 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 PIN1P1O15428 100 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 TIMM17BO60830 172 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 PMP2P02689 132 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 ZNF705BP0CI00 300 aaPredicted RBP3.26□□□□□ -1.89
PCF11-202ENST00000528336 DPPA3Q6W0C5 159 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 ZNF826PQ6ZT77 177 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 Q8NAQ8 132 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 SEC11CQ9BY50 192 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 REG4Q9BYZ8 158 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 BPESC1Q9GZL8 116 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 TAS2R4Q9NYW5 299 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 F8P00451 2351 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 CSPG4Q6UVK1 2322 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 TLN2Q9Y4G6 2542 aa3.26□□□□□ -1.89
PCF11-202ENST00000528336 ZANQ9Y493 2812 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 TRBV10-2A0A0K0K1G8 114 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 CYB5AP00167 134 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 IGLV1-51P01701 117 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
PCF11-202ENST00000528336 INSL4Q14641 139 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 Q6AWC8 147 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 SLC25A26Q70HW3 274 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 SLC35E3Q7Z769 313 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 Q8IYB0 196 aa3.25□□□□□ -1.89
PCF11-202ENST00000528336 CHCHD1Q96BP2 118 aaKnown RBP3.25□□□□□ -1.89
PCF11-202ENST00000528336 TRAV1-2A0A0B4J238 106 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 C3orf85A0A1B0GTC6 90 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 C7orf66A4D0T2 115 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 MCRIP1C9JLW8 97 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 TMEM262E9PQX1 116 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 HYPMO75409 117 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 RBP4P02753 201 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 CTSDP07339 412 aaPredicted RBP3.24□□□□□ -1.89
PCF11-202ENST00000528336 LY6EQ16553 131 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 PYY3Q5JQD4 70 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 LYZL1Q6UWQ5 148 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 LYPD6Q86Y78 171 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 DEFB108BQ8NET1 73 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 NABP2Q9BQ15 211 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 FKBP11Q9NYL4 201 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 KAAG1Q9UBP8 84 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 MED13LQ71F56 2210 aa3.24□□□□□ -1.89
PCF11-202ENST00000528336 TEP1Q99973 2627 aaKnown RBP3.23□□□□□ -1.89
PCF11-202ENST00000528336 IGKV1D-17A0A075B6S4 117 aa3.23□□□□□ -1.89
PCF11-202ENST00000528336 B4DSR2 109 aa3.23□□□□□ -1.89
PCF11-202ENST00000528336 H7C2G1 150 aa3.23□□□□□ -1.89
PCF11-202ENST00000528336 PDCD5O14737 125 aa3.23□□□□□ -1.89
PCF11-202ENST00000528336 LYRM1O43325 122 aa3.23□□□□□ -1.89
PCF11-202ENST00000528336 GYPAP02724 150 aa3.23□□□□□ -1.89
PCF11-202ENST00000528336 SS18Q15532 418 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms