RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 LECT2O14960 151 aa6.32□□□□□ -1.4
CHD7-208ENST00000528280 NCR2O95944 276 aa6.32□□□□□ -1.4
CHD7-208ENST00000528280 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
CHD7-208ENST00000528280 GAGE6Q13070 117 aa6.32□□□□□ -1.4
CHD7-208ENST00000528280 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
CHD7-208ENST00000528280 LINC00269Q8N2A0 174 aa6.32□□□□□ -1.4
CHD7-208ENST00000528280 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
CHD7-208ENST00000528280 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
CHD7-208ENST00000528280 LINC00587B1AMM8 73 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 H7C423 109 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 FABP4P15090 132 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 WFDC2Q14508 124 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 ATP5L2Q7Z4Y8 100 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 TSKUQ8WUA8 353 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 GTSF1Q8WW33 167 aa6.31□□□□□ -1.4
CHD7-208ENST00000528280 A0A1B0GUT8 65 aa6.3□□□□□ -1.4
CHD7-208ENST00000528280 AMTP48728 403 aa6.3□□□□□ -1.4
CHD7-208ENST00000528280 REG3AQ06141 175 aa6.3□□□□□ -1.4
CHD7-208ENST00000528280 Q5VSD8 79 aa6.3□□□□□ -1.4
CHD7-208ENST00000528280 TSTD3H0UI37 97 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 PPP1R17O96001 155 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 PLA2G1BP04054 148 aaKnown RBP6.29□□□□□ -1.4
CHD7-208ENST00000528280 PMCHP20382 165 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 RIGQ13278 110 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 Q6ZSA8 131 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 MRPL52Q86TS9 123 aaKnown RBP6.29□□□□□ -1.4
CHD7-208ENST00000528280 TMEM191AQ9H0A3 160 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 MRPL18Q9H0U6 180 aaKnown RBP6.29□□□□□ -1.4
CHD7-208ENST00000528280 NAT8BQ9UHF3 227 aa6.29□□□□□ -1.4
CHD7-208ENST00000528280 TRBV6-5A0A0K0K1A5 114 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 HIGD1CA8MV81 97 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 USP17L23D6RBM5 183 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 I3L3M4 83 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
CHD7-208ENST00000528280 AMMECR1LQ6DCA0 310 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 TMEM136Q6ZRR5 245 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 C20orf203Q8NBC4 194 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
CHD7-208ENST00000528280 SDHAF1A6NFY7 115 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 APCSP02743 223 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 ZNF25P17030 456 aaPredicted RBP6.27□□□□□ -1.41
CHD7-208ENST00000528280 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 PDZD11Q5EBL8 140 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 CHAC1Q9BUX1 264 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
CHD7-208ENST00000528280 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
CHD7-208ENST00000528280 TRAV26-2A0A0B4J265 109 aa6.26□□□□□ -1.41
CHD7-208ENST00000528280 A0A1B0GW15 77 aa6.26□□□□□ -1.41
CHD7-208ENST00000528280 RAB4AP20338 218 aa6.26□□□□□ -1.41
CHD7-208ENST00000528280 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
CHD7-208ENST00000528280 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
CHD7-208ENST00000528280 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.25□□□□□ -1.41
CHD7-208ENST00000528280 A0A1B0GXF2 115 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 VCYO14598 125 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 PRSS1P07477 247 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 RNASEKQ6P5S7 137 aaKnown RBP6.25□□□□□ -1.41
CHD7-208ENST00000528280 CLPSL2Q6UWE3 100 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 BAGE3Q86Y29 109 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 C9orf163Q8N9P6 203 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 NUP35Q8NFH5 326 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 RPL39LQ96EH5 51 aaKnown RBP6.25□□□□□ -1.41
CHD7-208ENST00000528280 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
CHD7-208ENST00000528280 IGLV10-54A0A075B6I4 117 aa6.24□□□□□ -1.41
CHD7-208ENST00000528280 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
CHD7-208ENST00000528280 HBBP68871 147 aa6.24□□□□□ -1.41
CHD7-208ENST00000528280 FAT1Q14517 4588 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 TCAPO15273 167 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 SERF1AO75920 110 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 FGF6P10767 208 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 DDTP30046 118 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 POLR2KP53803 58 aaKnown RBP6.23□□□□□ -1.41
CHD7-208ENST00000528280 CNBPP62633 177 aaKnown RBP6.23□□□□□ -1.41
CHD7-208ENST00000528280 LINC01620Q4KN68 170 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 OR5A1Q8NGJ0 315 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 RNF185Q96GF1 192 aa6.23□□□□□ -1.41
CHD7-208ENST00000528280 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 CCL25O15444 150 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 FCER1GP30273 86 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 LINC00310P59036 64 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 HAMPP81172 84 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 MRPL54Q6P161 138 aaKnown RBP6.22□□□□□ -1.41
CHD7-208ENST00000528280 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 LINC00528Q8N1L1 170 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 DEFB104AQ8WTQ1 72 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 KIR2DL4Q99706 377 aa6.22□□□□□ -1.41
CHD7-208ENST00000528280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
CHD7-208ENST00000528280 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
CHD7-208ENST00000528280 GAGE12HA6NDE8 117 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 J3QL48 77 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 TSHBP01222 138 aa6.21□□□□□ -1.42
CHD7-208ENST00000528280 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
CHD7-208ENST00000528280 SS18Q15532 418 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms