RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 KRTAP17-1Q9BYP8 105 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 MAP1LC3AQ9H492 121 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 DNAH8Q96JB1 4490 aa8.57□□□□□ -1.04
SCN3B-205ENST00000528267 LOC389332A0A1B0GUA5 103 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 IFITM10A6NMD0 228 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 VCYO14598 125 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
SCN3B-205ENST00000528267 PRSS3P2Q8NHM4 247 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 CHCHD1Q96BP2 118 aaKnown RBP8.56□□□□□ -1.04
SCN3B-205ENST00000528267 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 PRR34Q9NV39 138 aa8.56□□□□□ -1.04
SCN3B-205ENST00000528267 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 LRCOL1A6NCL2 159 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 PRSS47A8MTI9 375 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 HSBP1O75506 76 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 PPP1R17O96001 155 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 LINC00614P0C842 121 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 FABP4P15090 132 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 FUSP35637 526 aaKnown RBP eCLIP8.55□□□□□ -1.04
SCN3B-205ENST00000528267 AKR1D1P51857 326 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 FA2HQ7L5A8 372 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 HIST1H2BLQ99880 126 aa8.55□□□□□ -1.04
SCN3B-205ENST00000528267 TCAPO15273 167 aa8.54□□□□□ -1.04
SCN3B-205ENST00000528267 FGF6P10767 208 aa8.54□□□□□ -1.04
SCN3B-205ENST00000528267 IFI27P40305 119 aaPredicted RBP8.54□□□□□ -1.04
SCN3B-205ENST00000528267 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SCN3B-205ENST00000528267 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SCN3B-205ENST00000528267 FAM104AQ969W3 186 aa8.54□□□□□ -1.04
SCN3B-205ENST00000528267 A0A087WTM6 91 aa8.53□□□□□ -1.04
SCN3B-205ENST00000528267 UBE2L6O14933 153 aa8.53□□□□□ -1.04
SCN3B-205ENST00000528267 NXT2Q9NPJ8 142 aaKnown RBP8.53□□□□□ -1.04
SCN3B-205ENST00000528267 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
SCN3B-205ENST00000528267 KIAA1109Q2LD37 5005 aa8.53□□□□□ -1.04
SCN3B-205ENST00000528267 TRAV8-3A0A0A6YYJ7 113 aa8.52□□□□□ -1.05
SCN3B-205ENST00000528267 PKIAP61925 76 aa8.52□□□□□ -1.05
SCN3B-205ENST00000528267 RPL39P62891 51 aaKnown RBP8.52□□□□□ -1.05
SCN3B-205ENST00000528267 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
SCN3B-205ENST00000528267 Q8N8P6 123 aa8.52□□□□□ -1.05
SCN3B-205ENST00000528267 OR10D4PQ8NGN7 298 aa8.52□□□□□ -1.05
SCN3B-205ENST00000528267 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.05
SCN3B-205ENST00000528267 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
SCN3B-205ENST00000528267 RYR1P21817 5038 aa8.51□□□□□ -1.05
SCN3B-205ENST00000528267 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
SCN3B-205ENST00000528267 H7C423 109 aa8.51□□□□□ -1.05
SCN3B-205ENST00000528267 FCER1GP30273 86 aa8.51□□□□□ -1.05
SCN3B-205ENST00000528267 REG3AQ06141 175 aa8.51□□□□□ -1.05
SCN3B-205ENST00000528267 MRPL52Q86TS9 123 aaKnown RBP8.51□□□□□ -1.05
SCN3B-205ENST00000528267 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
SCN3B-205ENST00000528267 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
SCN3B-205ENST00000528267 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
SCN3B-205ENST00000528267 LECT2O14960 151 aa8.5□□□□□ -1.05
SCN3B-205ENST00000528267 CRPP02741 224 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 RNASE13Q5GAN3 156 aaKnown RBP8.49□□□□□ -1.05
SCN3B-205ENST00000528267 Q6ZUT4 128 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 BAALCQ8WXS3 180 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 HSPG2P98160 4391 aa8.49□□□□□ -1.05
SCN3B-205ENST00000528267 PSCAO43653 123 aa8.48□□□□□ -1.05
SCN3B-205ENST00000528267 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
SCN3B-205ENST00000528267 MIAQ16674 131 aa8.48□□□□□ -1.05
SCN3B-205ENST00000528267 AMMECR1LQ6DCA0 310 aa8.48□□□□□ -1.05
SCN3B-205ENST00000528267 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
SCN3B-205ENST00000528267 HERC2O95714 4834 aa8.47□□□□□ -1.05
SCN3B-205ENST00000528267 IGKV3OR2-268A0A0C4DH90 116 aa8.47□□□□□ -1.05
SCN3B-205ENST00000528267 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
SCN3B-205ENST00000528267 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
SCN3B-205ENST00000528267 A0A096LNJ9 63 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 K7EMI3 77 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 HBDP02042 147 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 Q8N814 137 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.06
SCN3B-205ENST00000528267 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
SCN3B-205ENST00000528267 ORMDL2Q53FV1 153 aa8.45□□□□□ -1.06
SCN3B-205ENST00000528267 ZNF664Q8N3J9 261 aa8.45□□□□□ -1.06
SCN3B-205ENST00000528267 RMI2Q96E14 147 aa8.45□□□□□ -1.06
SCN3B-205ENST00000528267 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
SCN3B-205ENST00000528267 SMIM6P0DI80 62 aa8.44□□□□□ -1.06
SCN3B-205ENST00000528267 KRTDAPP60985 99 aa8.44□□□□□ -1.06
SCN3B-205ENST00000528267 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
SCN3B-205ENST00000528267 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
SCN3B-205ENST00000528267 HSPB8Q9UJY1 196 aa8.44□□□□□ -1.06
SCN3B-205ENST00000528267 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
SCN3B-205ENST00000528267 IGLV4-3A0A075B6K6 122 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 TRAV8-4A0A0B4J246 113 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 GAGE12HA6NDE8 117 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 C3orf79P0CE67 100 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 FOXI1Q12951 378 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 JOSD1Q15040 202 aaPredicted RBP8.43□□□□□ -1.06
SCN3B-205ENST00000528267 PYY3Q5JQD4 70 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
SCN3B-205ENST00000528267 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms