RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 KIAA1644Q3SXP7 199 aa10.92□□□□□ -0.66
SSH3-205ENST00000527821 MRPL52Q86TS9 123 aaKnown RBP10.92□□□□□ -0.66
SSH3-205ENST00000527821 SLC7A5P1Q8MH63 180 aa10.92□□□□□ -0.66
SSH3-205ENST00000527821 COX19Q49B96 90 aa10.91□□□□□ -0.66
SSH3-205ENST00000527821 NTN5Q8WTR8 489 aaPredicted RBP10.91□□□□□ -0.66
SSH3-205ENST00000527821 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.9□□□□□ -0.66
SSH3-205ENST00000527821 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
SSH3-205ENST00000527821 PRSS47A8MTI9 375 aa10.9□□□□□ -0.66
SSH3-205ENST00000527821 KRTAP26-1Q6PEX3 210 aa10.9□□□□□ -0.66
SSH3-205ENST00000527821 UBE2D4Q9Y2X8 147 aa10.9□□□□□ -0.66
SSH3-205ENST00000527821 DYNC1H1Q14204 4646 aaKnown RBP10.89□□□□□ -0.67
SSH3-205ENST00000527821 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
SSH3-205ENST00000527821 CDC42SE2Q9NRR3 84 aa10.89□□□□□ -0.67
SSH3-205ENST00000527821 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
SSH3-205ENST00000527821 USP17L23D6RBM5 183 aa10.88□□□□□ -0.67
SSH3-205ENST00000527821 MT-ND6P03923 174 aa10.88□□□□□ -0.67
SSH3-205ENST00000527821 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
SSH3-205ENST00000527821 C14orf177Q52M58 125 aa10.88□□□□□ -0.67
SSH3-205ENST00000527821 Q8N8P6 123 aa10.88□□□□□ -0.67
SSH3-205ENST00000527821 CSDC2Q9Y534 153 aaKnown RBP10.88□□□□□ -0.67
SSH3-205ENST00000527821 GCSHP23434 173 aa10.87□□□□□ -0.67
SSH3-205ENST00000527821 TIMM21Q9BVV7 248 aa10.87□□□□□ -0.67
SSH3-205ENST00000527821 MRPL18Q9H0U6 180 aaKnown RBP10.87□□□□□ -0.67
SSH3-205ENST00000527821 GAGE12HA6NDE8 117 aa10.86□□□□□ -0.67
SSH3-205ENST00000527821 FABP9Q0Z7S8 132 aa10.86□□□□□ -0.67
SSH3-205ENST00000527821 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
SSH3-205ENST00000527821 NXT2Q9NPJ8 142 aaKnown RBP10.86□□□□□ -0.67
SSH3-205ENST00000527821 DNAH5Q8TE73 4624 aa10.85□□□□□ -0.67
SSH3-205ENST00000527821 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
SSH3-205ENST00000527821 SS18Q15532 418 aa10.85□□□□□ -0.67
SSH3-205ENST00000527821 RNASE13Q5GAN3 156 aaKnown RBP10.85□□□□□ -0.67
SSH3-205ENST00000527821 Q6ZUT4 128 aa10.85□□□□□ -0.67
SSH3-205ENST00000527821 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
SSH3-205ENST00000527821 ALKBH7Q9BT30 221 aaPredicted RBP10.84□□□□□ -0.67
SSH3-205ENST00000527821 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
SSH3-205ENST00000527821 K7EMI3 77 aa10.83□□□□□ -0.68
SSH3-205ENST00000527821 CCL25O15444 150 aa10.83□□□□□ -0.68
SSH3-205ENST00000527821 XCL1P47992 114 aa10.83□□□□□ -0.68
SSH3-205ENST00000527821 KRTAP10-1P60331 282 aa10.83□□□□□ -0.68
SSH3-205ENST00000527821 ORMDL2Q53FV1 153 aa10.83□□□□□ -0.68
SSH3-205ENST00000527821 TRAPPC1Q9Y5R8 145 aa10.83□□□□□ -0.68
SSH3-205ENST00000527821 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
SSH3-205ENST00000527821 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
SSH3-205ENST00000527821 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
SSH3-205ENST00000527821 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
SSH3-205ENST00000527821 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
SSH3-205ENST00000527821 PRSS1P07477 247 aa10.81□□□□□ -0.68
SSH3-205ENST00000527821 FOXI1Q12951 378 aa10.81□□□□□ -0.68
SSH3-205ENST00000527821 OPRPNQ99935 248 aaPredicted RBP10.81□□□□□ -0.68
SSH3-205ENST00000527821 SMCO4Q9NRQ5 59 aa10.81□□□□□ -0.68
SSH3-205ENST00000527821 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 C1orf196B1AJZ1 125 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 MRPS36P82909 103 aaKnown RBP10.8□□□□□ -0.68
SSH3-205ENST00000527821 CFAP161Q6P656 301 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 C2orf66Q6UXQ4 117 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 YPEL4Q96NS1 127 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 PYGO1Q9Y3Y4 419 aa10.8□□□□□ -0.68
SSH3-205ENST00000527821 KIAA1109Q2LD37 5005 aa10.79□□□□□ -0.68
SSH3-205ENST00000527821 CD164L2Q6UWJ8 174 aa10.79□□□□□ -0.68
SSH3-205ENST00000527821 G0S2P27469 103 aa10.78□□□□□ -0.68
SSH3-205ENST00000527821 LINC01620Q4KN68 170 aa10.78□□□□□ -0.68
SSH3-205ENST00000527821 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
SSH3-205ENST00000527821 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
SSH3-205ENST00000527821 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
SSH3-205ENST00000527821 FA2HQ7L5A8 372 aa10.77□□□□□ -0.69
SSH3-205ENST00000527821 C15orf56Q8N910 161 aa10.77□□□□□ -0.69
SSH3-205ENST00000527821 AP5S1Q9NUS5 200 aa10.77□□□□□ -0.69
SSH3-205ENST00000527821 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
SSH3-205ENST00000527821 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
SSH3-205ENST00000527821 Q6ZN92 141 aa10.75□□□□□ -0.69
SSH3-205ENST00000527821 IGHV1-58A0A0C4DH39 117 aa10.74□□□□□ -0.69
SSH3-205ENST00000527821 COX7A2LO14548 114 aa10.74□□□□□ -0.69
SSH3-205ENST00000527821 MALP21145 153 aa10.74□□□□□ -0.69
SSH3-205ENST00000527821 TEX43Q6ZNM6 134 aa10.74□□□□□ -0.69
SSH3-205ENST00000527821 TOMM6Q96B49 74 aa10.74□□□□□ -0.69
SSH3-205ENST00000527821 LINC01546A6NGU7 62 aa10.73□□□□□ -0.69
SSH3-205ENST00000527821 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
SSH3-205ENST00000527821 C18orf32Q8TCD1 76 aa10.73□□□□□ -0.69
SSH3-205ENST00000527821 C2orf88Q9BSF0 95 aa10.73□□□□□ -0.69
SSH3-205ENST00000527821 VCX2Q9H322 139 aa10.73□□□□□ -0.69
SSH3-205ENST00000527821 RYR1P21817 5038 aa10.73□□□□□ -0.69
SSH3-205ENST00000527821 GVQW2A0A096LPI5 108 aaPredicted RBP10.72□□□□□ -0.69
SSH3-205ENST00000527821 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
SSH3-205ENST00000527821 NPSP0C0P6 89 aa10.72□□□□□ -0.69
SSH3-205ENST00000527821 XGP55808 180 aa10.72□□□□□ -0.69
SSH3-205ENST00000527821 CNBPP62633 177 aaKnown RBP10.72□□□□□ -0.69
SSH3-205ENST00000527821 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
SSH3-205ENST00000527821 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
SSH3-205ENST00000527821 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
SSH3-205ENST00000527821 LINC01549A6NIU2 74 aa10.71□□□□□ -0.69
SSH3-205ENST00000527821 HAMPP81172 84 aa10.71□□□□□ -0.69
SSH3-205ENST00000527821 PAPPA-AS1Q5QFB9 102 aa10.71□□□□□ -0.69
SSH3-205ENST00000527821 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.69
SSH3-205ENST00000527821 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.69
SSH3-205ENST00000527821 TIMM17AQ99595 171 aa10.71□□□□□ -0.69
SSH3-205ENST00000527821 HERC2O95714 4834 aa10.71□□□□□ -0.7
SSH3-205ENST00000527821 APOBP04114 4563 aaKnown RBP10.7□□□□□ -0.7
SSH3-205ENST00000527821 SLPIP03973 132 aa10.7□□□□□ -0.7
SSH3-205ENST00000527821 LINC00614P0C842 121 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms