RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GAGE4Q13068 117 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 GAGE5Q13069 117 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 GAGE13Q4V321 117 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 VCX2Q9H322 139 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.18□□□□□ -0.3
SMPD1-203ENST00000527275 TRBV6-4A0A1B0GX49 114 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 IGKV2-29A2NJV5 120 aaPredicted RBP13.18□□□□□ -0.3
SMPD1-203ENST00000527275 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
SMPD1-203ENST00000527275 TTTY13Q9BZ97 58 aa13.18□□□□□ -0.3
SMPD1-203ENST00000527275 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
SMPD1-203ENST00000527275 ATP5G1P05496 136 aa13.17□□□□□ -0.3
SMPD1-203ENST00000527275 NPSP0C0P6 89 aa13.17□□□□□ -0.3
SMPD1-203ENST00000527275 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
SMPD1-203ENST00000527275 UBE2D3P61077 147 aa13.17□□□□□ -0.3
SMPD1-203ENST00000527275 UBE2D2P62837 147 aa13.17□□□□□ -0.3
SMPD1-203ENST00000527275 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
SMPD1-203ENST00000527275 Q6ZTC4 211 aa13.17□□□□□ -0.3
SMPD1-203ENST00000527275 SPANXA1Q9NS26 97 aa13.16□□□□□ -0.3
SMPD1-203ENST00000527275 UBE2D4Q9Y2X8 147 aa13.16□□□□□ -0.3
SMPD1-203ENST00000527275 HTN3P15516 51 aa13.15□□□□□ -0.3
SMPD1-203ENST00000527275 TMEM97Q5BJF2 176 aa13.15□□□□□ -0.3
SMPD1-203ENST00000527275 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
SMPD1-203ENST00000527275 TRAV8-6A0A0B4J262 113 aa13.15□□□□□ -0.3
SMPD1-203ENST00000527275 CRYBA4P53673 196 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 AMELXQ99217 191 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 LOC100131303A0A0U1RQF7 123 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 E9PLD3 99 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 F5H768 121 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 BVES-AS1Q5T3Y7 98 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
SMPD1-203ENST00000527275 NFE4Q86UQ8 179 aa13.13□□□□□ -0.31
SMPD1-203ENST00000527275 PRADC1Q9BSG0 188 aa13.13□□□□□ -0.31
SMPD1-203ENST00000527275 TMEM170BQ5T4T1 132 aa13.13□□□□□ -0.31
SMPD1-203ENST00000527275 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
SMPD1-203ENST00000527275 PRO0255Q9UI72 69 aa13.13□□□□□ -0.31
SMPD1-203ENST00000527275 CHAC1Q9BUX1 264 aa13.11□□□□□ -0.31
SMPD1-203ENST00000527275 TRBV25-1A0A075B6N4 114 aa13.11□□□□□ -0.31
SMPD1-203ENST00000527275 HERVK_113P61574 105 aa13.11□□□□□ -0.31
SMPD1-203ENST00000527275 RNASE13Q5GAN3 156 aaKnown RBP13.11□□□□□ -0.31
SMPD1-203ENST00000527275 Q6ZVH6 145 aa13.11□□□□□ -0.31
SMPD1-203ENST00000527275 A0A0J9YXV3 536 aa13.1□□□□□ -0.31
SMPD1-203ENST00000527275 TIMM21Q9BVV7 248 aa13.1□□□□□ -0.31
SMPD1-203ENST00000527275 GTSF1LQ9H1H1 148 aa13.1□□□□□ -0.31
SMPD1-203ENST00000527275 HIGD1BQ9P298 99 aa13.1□□□□□ -0.31
SMPD1-203ENST00000527275 TRAV26-1A0A087WT03 109 aa13.1□□□□□ -0.31
SMPD1-203ENST00000527275 A0A0J9YY99 117 aa13.1□□□□□ -0.31
SMPD1-203ENST00000527275 DGAT2L7PQ6IED9 249 aa13.09□□□□□ -0.31
SMPD1-203ENST00000527275 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
SMPD1-203ENST00000527275 TGP01266 2768 aa13.09□□□□□ -0.31
SMPD1-203ENST00000527275 PAX4O43316 350 aa13.08□□□□□ -0.31
SMPD1-203ENST00000527275 HSD52Q0P140 79 aa13.08□□□□□ -0.31
SMPD1-203ENST00000527275 Q6ZUT4 128 aa13.08□□□□□ -0.31
SMPD1-203ENST00000527275 DEFB131BA0A096LNP1 70 aa13.08□□□□□ -0.32
SMPD1-203ENST00000527275 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
SMPD1-203ENST00000527275 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
SMPD1-203ENST00000527275 LINC00694P0DN24 101 aa13.07□□□□□ -0.32
SMPD1-203ENST00000527275 ORAOV1Q8WV07 137 aa13.07□□□□□ -0.32
SMPD1-203ENST00000527275 GYPEP15421 78 aa13.06□□□□□ -0.32
SMPD1-203ENST00000527275 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
SMPD1-203ENST00000527275 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
SMPD1-203ENST00000527275 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
SMPD1-203ENST00000527275 TMEM243Q9BU79 118 aa13.05□□□□□ -0.32
SMPD1-203ENST00000527275 CSDC2Q9Y534 153 aaKnown RBP13.05□□□□□ -0.32
SMPD1-203ENST00000527275 SMAGPQ0VAQ4 97 aa13.04□□□□□ -0.32
SMPD1-203ENST00000527275 TRAV10A0A0B4J240 114 aa13.04□□□□□ -0.32
SMPD1-203ENST00000527275 ZNF815PA8K554 130 aa13.04□□□□□ -0.32
SMPD1-203ENST00000527275 UBE2L6O14933 153 aa13.04□□□□□ -0.32
SMPD1-203ENST00000527275 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
SMPD1-203ENST00000527275 SEC11AP67812 179 aa13.03□□□□□ -0.32
SMPD1-203ENST00000527275 UBE2D1P51668 147 aa13.02□□□□□ -0.33
SMPD1-203ENST00000527275 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
SMPD1-203ENST00000527275 H7C423 109 aa13.01□□□□□ -0.33
SMPD1-203ENST00000527275 AMMECR1LQ6DCA0 310 aa13.01□□□□□ -0.33
SMPD1-203ENST00000527275 CCL25O15444 150 aa13.01□□□□□ -0.33
SMPD1-203ENST00000527275 TSPEAR-AS2P59090 65 aa13.01□□□□□ -0.33
SMPD1-203ENST00000527275 OR5A1Q8NGJ0 315 aa13.01□□□□□ -0.33
SMPD1-203ENST00000527275 A0A096LPF7 62 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 J3QQQ9 107 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 LEPROTO15243 131 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 ATP6V0E2Q8NHE4 81 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 CDC42SE2Q9NRR3 84 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 GCSHP23434 173 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 TMEM101Q96IK0 257 aa13□□□□□ -0.33
SMPD1-203ENST00000527275 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
SMPD1-203ENST00000527275 H3BNG1 76 aa12.99□□□□□ -0.33
SMPD1-203ENST00000527275 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
SMPD1-203ENST00000527275 GEMIN7Q9H840 131 aaKnown RBP12.99□□□□□ -0.33
SMPD1-203ENST00000527275 A6NDN8 102 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 TAX1BP3O14907 124 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 LGALS3P17931 250 aaKnown RBP12.98□□□□□ -0.33
SMPD1-203ENST00000527275 MRPL23Q16540 153 aaKnown RBP12.98□□□□□ -0.33
SMPD1-203ENST00000527275 TAL2Q16559 108 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 SCGB1D4Q6XE38 83 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 PLEKHB2Q96CS7 222 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 TIRAPP58753 221 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 UBE2V1Q13404 147 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 ICOSQ9Y6W8 199 aa12.98□□□□□ -0.33
SMPD1-203ENST00000527275 GAGE6Q13070 117 aa12.97□□□□□ -0.33
SMPD1-203ENST00000527275 CEND1Q8N111 149 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms