RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 KIR2DL4Q99706 377 aa4.3□□□□□ -1.72
ATPAF1-208ENST00000526821 TRBV7-3A0A075B6L6 115 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 DEFB4AO15263 64 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 SCGB1D1O95968 90 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 PRB2P02812 416 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 DEFB130BP0DP73 79 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 DEFB130AP0DP74 79 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 G0S2P27469 103 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 UBE2D3P61077 147 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 UBE2D2P62837 147 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 COTL1Q14019 142 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 LINC01545Q5VT33 79 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 TEX43Q6ZNM6 134 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 IFI27L1Q96BM0 104 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 TM2D3Q9BRN9 247 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 C11orf68Q9H3H3 251 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 RETNQ9HD89 108 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 CELA1Q9UNI1 258 aa4.29□□□□□ -1.72
ATPAF1-208ENST00000526821 TRGV4A0A0C4DH28 118 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 TEX48A0A1B0GUV7 120 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 ATP5LO75964 103 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 SPART-AS1P0CW21 52 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 ZNF25P17030 456 aaPredicted RBP4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 CRYBA4P53673 196 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 LGALS9CQ6DKI2 356 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 ERASQ7Z444 233 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 ZNRF2Q8NHG8 242 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 DAZ3Q9NR90 486 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 HHLA3Q9XRX5 114 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 CYSLTR1Q9Y271 337 aa4.28□□□□□ -1.72
ATPAF1-208ENST00000526821 TRAV12-1A0A0B4J245 112 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 DAD1P61803 113 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 RPL39P62891 51 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 GAGE4Q13068 117 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 GAGE5Q13069 117 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 C12orf74Q32Q52 190 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 DEFB104AQ8WTQ1 72 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 FAM104AQ969W3 186 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 TMEM141Q96I45 108 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 TIMM17AQ99595 171 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 PRADC1Q9BSG0 188 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 PRO0255Q9UI72 69 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
ATPAF1-208ENST00000526821 IGHV3-38A0A0C4DH36 116 aa4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 C20orf202A1L168 122 aa4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 ATP5G1P05496 136 aa4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 PHLDA1Q8WV24 401 aaPredicted RBP4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 BAALCQ8WXS3 180 aa4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 SCGB3A1Q96QR1 104 aa4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 GTSF1LQ9H1H1 148 aa4.26□□□□□ -1.73
ATPAF1-208ENST00000526821 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 TRAV9-2A0A087WT02 112 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 A0A087WX48 190 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 K7EP13 123 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 PRSS1P07477 247 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 RBX1P62877 108 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 TIMM21Q9BVV7 248 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 UBE2D4Q9Y2X8 147 aa4.25□□□□□ -1.73
ATPAF1-208ENST00000526821 IGLV4-3A0A075B6K6 122 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 TRAV26-1A0A087WT03 109 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 TRBV6-8A0A0A6YYG3 113 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 A0A0J9YWU9 116 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 H0Y8G0 127 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 H3BNG1 76 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 H7C423 109 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 PMVKQ15126 192 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 MAJINQ3KP22 176 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 TMEM97Q5BJF2 176 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 DEFB121Q5J5C9 76 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 COL5A1-AS1Q5SY13 56 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 Q6ZN92 141 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 AMELXQ99217 191 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 PMCHL2Q9BQD1 86 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 VAMP8Q9BV40 100 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 CSDC2Q9Y534 153 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 STAB2Q8WWQ8 2551 aa4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-208ENST00000526821 IGLV4-69A0A075B6H9 119 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms