RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 WFDC2Q14508 124 aa11.38□□□□□ -0.59
LMX1B-203ENST00000526117 CLPSL2Q6UWE3 100 aa11.38□□□□□ -0.59
LMX1B-203ENST00000526117 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
LMX1B-203ENST00000526117 UBE2D4Q9Y2X8 147 aa11.38□□□□□ -0.59
LMX1B-203ENST00000526117 C14orf177Q52M58 125 aa11.37□□□□□ -0.59
LMX1B-203ENST00000526117 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
LMX1B-203ENST00000526117 CDC42SE2Q9NRR3 84 aa11.37□□□□□ -0.59
LMX1B-203ENST00000526117 Q8N8P6 123 aa11.36□□□□□ -0.59
LMX1B-203ENST00000526117 CDK2AP2O75956 126 aa11.35□□□□□ -0.59
LMX1B-203ENST00000526117 RAB5AP20339 215 aa11.35□□□□□ -0.59
LMX1B-203ENST00000526117 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
LMX1B-203ENST00000526117 NXT2Q9NPJ8 142 aaKnown RBP11.35□□□□□ -0.59
LMX1B-203ENST00000526117 CCL25O15444 150 aa11.34□□□□□ -0.59
LMX1B-203ENST00000526117 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
LMX1B-203ENST00000526117 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
LMX1B-203ENST00000526117 DNAH5Q8TE73 4624 aa11.34□□□□□ -0.59
LMX1B-203ENST00000526117 LRP1BQ9NZR2 4599 aa11.33□□□□□ -0.6
LMX1B-203ENST00000526117 IGLV10-54A0A075B6I4 117 aa11.33□□□□□ -0.6
LMX1B-203ENST00000526117 IGLV5-52A0A0A0MRZ9 124 aa11.33□□□□□ -0.6
LMX1B-203ENST00000526117 MRPS36P82909 103 aaKnown RBP11.33□□□□□ -0.6
LMX1B-203ENST00000526117 DGAT2L7PQ6IED9 249 aa11.33□□□□□ -0.6
LMX1B-203ENST00000526117 LECT2O14960 151 aa11.32□□□□□ -0.6
LMX1B-203ENST00000526117 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
LMX1B-203ENST00000526117 KRTAP17-1Q9BYP8 105 aa11.32□□□□□ -0.6
LMX1B-203ENST00000526117 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
LMX1B-203ENST00000526117 LINC00959A0A1B0GUT2 108 aa11.31□□□□□ -0.6
LMX1B-203ENST00000526117 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
LMX1B-203ENST00000526117 GCSHP23434 173 aa11.31□□□□□ -0.6
LMX1B-203ENST00000526117 RPL39P62891 51 aaKnown RBP11.31□□□□□ -0.6
LMX1B-203ENST00000526117 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
LMX1B-203ENST00000526117 SLC7A5P1Q8MH63 180 aa11.31□□□□□ -0.6
LMX1B-203ENST00000526117 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
LMX1B-203ENST00000526117 ALKBH7Q9BT30 221 aaPredicted RBP11.31□□□□□ -0.6
LMX1B-203ENST00000526117 MRPL18Q9H0U6 180 aaKnown RBP11.31□□□□□ -0.6
LMX1B-203ENST00000526117 TGIF2-C20orf24A0A0A6YYL0 155 aa11.3□□□□□ -0.6
LMX1B-203ENST00000526117 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
LMX1B-203ENST00000526117 LINC01546A6NGU7 62 aa11.3□□□□□ -0.6
LMX1B-203ENST00000526117 NPSP0C0P6 89 aa11.3□□□□□ -0.6
LMX1B-203ENST00000526117 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
LMX1B-203ENST00000526117 G0S2P27469 103 aa11.29□□□□□ -0.6
LMX1B-203ENST00000526117 SS18Q15532 418 aa11.29□□□□□ -0.6
LMX1B-203ENST00000526117 FAM104AQ969W3 186 aa11.29□□□□□ -0.6
LMX1B-203ENST00000526117 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
LMX1B-203ENST00000526117 C1orf196B1AJZ1 125 aa11.28□□□□□ -0.6
LMX1B-203ENST00000526117 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.6
LMX1B-203ENST00000526117 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
LMX1B-203ENST00000526117 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
LMX1B-203ENST00000526117 FOXI1Q12951 378 aa11.28□□□□□ -0.6
LMX1B-203ENST00000526117 Q6ZUT4 128 aa11.28□□□□□ -0.6
LMX1B-203ENST00000526117 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 PRSS1P07477 247 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 KRTAP10-1P60331 282 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.61
LMX1B-203ENST00000526117 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
LMX1B-203ENST00000526117 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
LMX1B-203ENST00000526117 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
LMX1B-203ENST00000526117 CNBPP62633 177 aaKnown RBP11.25□□□□□ -0.61
LMX1B-203ENST00000526117 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
LMX1B-203ENST00000526117 IGLV4-3A0A075B6K6 122 aa11.24□□□□□ -0.61
LMX1B-203ENST00000526117 XCL1P47992 114 aa11.24□□□□□ -0.61
LMX1B-203ENST00000526117 C15orf56Q8N910 161 aa11.24□□□□□ -0.61
LMX1B-203ENST00000526117 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
LMX1B-203ENST00000526117 APOBP04114 4563 aaKnown RBP11.23□□□□□ -0.61
LMX1B-203ENST00000526117 GVQW2A0A096LPI5 108 aaPredicted RBP11.23□□□□□ -0.61
LMX1B-203ENST00000526117 Q6ZSA8 131 aa11.23□□□□□ -0.61
LMX1B-203ENST00000526117 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
LMX1B-203ENST00000526117 IGIPA6NJ69 53 aa11.22□□□□□ -0.61
LMX1B-203ENST00000526117 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
LMX1B-203ENST00000526117 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
LMX1B-203ENST00000526117 RYR1P21817 5038 aa11.21□□□□□ -0.61
LMX1B-203ENST00000526117 CBLN2Q8IUK8 224 aa11.21□□□□□ -0.61
LMX1B-203ENST00000526117 C9orf163Q8N9P6 203 aa11.21□□□□□ -0.61
LMX1B-203ENST00000526117 TIMM17AQ99595 171 aa11.21□□□□□ -0.61
LMX1B-203ENST00000526117 OPRPNQ99935 248 aaPredicted RBP11.21□□□□□ -0.61
LMX1B-203ENST00000526117 HSPG2P98160 4391 aa11.21□□□□□ -0.62
LMX1B-203ENST00000526117 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 hDV102S1A0JD36 115 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 C18orf32Q8TCD1 76 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 AMELXQ99217 191 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 AP5S1Q9NUS5 200 aa11.2□□□□□ -0.62
LMX1B-203ENST00000526117 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
LMX1B-203ENST00000526117 XGP55808 180 aa11.19□□□□□ -0.62
LMX1B-203ENST00000526117 Q6ZN92 141 aa11.19□□□□□ -0.62
LMX1B-203ENST00000526117 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
LMX1B-203ENST00000526117 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
LMX1B-203ENST00000526117 COX7A2LO14548 114 aa11.18□□□□□ -0.62
LMX1B-203ENST00000526117 TEX43Q6ZNM6 134 aa11.18□□□□□ -0.62
LMX1B-203ENST00000526117 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
LMX1B-203ENST00000526117 ERASQ7Z444 233 aa11.18□□□□□ -0.62
LMX1B-203ENST00000526117 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
LMX1B-203ENST00000526117 SLPIP03973 132 aa11.17□□□□□ -0.62
LMX1B-203ENST00000526117 LINC00173Q6ZV60 143 aa11.17□□□□□ -0.62
LMX1B-203ENST00000526117 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
LMX1B-203ENST00000526117 LINC00614P0C842 121 aa11.16□□□□□ -0.62
LMX1B-203ENST00000526117 RAB5BP61020 215 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms